Literature DB >> 18282635

Application of PDF417 symbology for 'DNA Barcoding'.

N Pradeep Kumar, A R Rajavel, P Jambulingam.   

Abstract

DNA sequences consisting of about 600 base pairs of the 5' region of the cytochrome c oxidase subunit 1 (COI) gene has been proposed as DNA Barcodes for taxonomical identification of species in different animals. We evaluated the application of two-dimensional barcodes for 'DNA Barcoding'. 'PDF417' symbology was applied to convert DNA Barcode sequences already proposed [N. Pradeep Kumar, A.R. Rajavel, R. Natarajan, P. Jambulingam, DNA Barcodes can distinguish species of Indian mosquitoes (Diptera: Culicidae). J. Med. Entomol. 77 (2007) 1-7.] for 10 different species of mosquitoes prevalent in India. Decoding of these digital images using 2-D scanner and a suitable software reproduced the input DNA sequences unchanged. This analysis indicated the utility of PDF417 for 'DNA Barcoding', which could be of definite use for taxonomic documentation of animals.

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Year:  2008        PMID: 18282635     DOI: 10.1016/j.cmpb.2007.12.011

Source DB:  PubMed          Journal:  Comput Methods Programs Biomed        ISSN: 0169-2607            Impact factor:   5.428


  3 in total

1.  Traceability and Quality Control in Traditional Chinese Medicine: From Chemical Fingerprint to Two-Dimensional Barcode.

Authors:  Yong Cai; Xiwen Li; Mei Li; Xiaojia Chen; Hao Hu; Jingyun Ni; Yitao Wang
Journal:  Evid Based Complement Alternat Med       Date:  2015-05-18       Impact factor: 2.629

2.  Converting Panax ginseng DNA and chemical fingerprints into two-dimensional barcode.

Authors:  Yong Cai; Peng Li; Xi-Wen Li; Jing Zhao; Hai Chen; Qing Yang; Hao Hu
Journal:  J Ginseng Res       Date:  2016-07-21       Impact factor: 6.060

3.  DNA barcode goes two-dimensions: DNA QR code web server.

Authors:  Chang Liu; Linchun Shi; Xiaolan Xu; Huan Li; Hang Xing; Dong Liang; Kun Jiang; Xiaohui Pang; Jingyuan Song; Shilin Chen
Journal:  PLoS One       Date:  2012-05-04       Impact factor: 3.240

  3 in total

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