Literature DB >> 18278035

Detecting native folds in mixtures of proteins that contain disulfide bonds.

Mahesh Narayan1, Ervin Welker, Huili Zhai, Xuemei Han, Guoqiang Xu, Fred W McLafferty, Harold A Scheraga.   

Abstract

High-throughput in vitro refolding of proteins that contain disulfide bonds, for which soluble expression is particularly difficult, is severely impeded by the absence of effective methods for detecting their native forms. We demonstrate such a method, which combines mass spectrometry with mild reductions, requires no prior experimentation or knowledge of proteins' physicochemical characteristics, function or activity, and is amenable to automation. These are necessary criteria for structural genomics and proteomics applications.

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Year:  2008        PMID: 18278035      PMCID: PMC2602968          DOI: 10.1038/nbt1380

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  15 in total

1.  Conformational propensities of protein folding intermediates: distribution of species in the 1S, 2S, and 3S ensembles of the [C40A,C95A] mutant of bovine pancreatic ribonuclease A.

Authors:  William J Wedemeyer; Xiaobing Xu; Ervin Welker; Harold A Scheraga
Journal:  Biochemistry       Date:  2002-02-05       Impact factor: 3.162

2.  Predicting redox state of cysteines in proteins.

Authors:  András Fiser; István Simon
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

3.  A new method for rapid characterization of the folding pathways of multidisulfide-containing proteins.

Authors:  Ervin Welker; Laura Hathaway; Harold A Scheraga
Journal:  J Am Chem Soc       Date:  2004-03-31       Impact factor: 15.419

4.  Evaluating protein structures determined by structural genomics consortia.

Authors:  Aneerban Bhattacharya; Roberto Tejero; Gaetano T Montelione
Journal:  Proteins       Date:  2007-03-01

5.  Top down characterization of larger proteins (45 kDa) by electron capture dissociation mass spectrometry.

Authors:  Ying Ge; Brian G Lawhorn; Mariam ElNaggar; Erick Strauss; Joo-Heon Park; Tadhg P Begley; Fred W McLafferty
Journal:  J Am Chem Soc       Date:  2002-01-30       Impact factor: 15.419

6.  Structural determinants of oxidative folding in proteins.

Authors:  E Welker; M Narayan; W J Wedemeyer; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

7.  Oxidative folding of proteins.

Authors:  M Narayan; E Welker; W J Wedemeyer; H A Scheraga
Journal:  Acc Chem Res       Date:  2000-11       Impact factor: 22.384

Review 8.  Disulfide bonds and protein folding.

Authors:  W J Wedemeyer; E Welker; M Narayan; H A Scheraga
Journal:  Biochemistry       Date:  2000-04-18       Impact factor: 3.162

9.  Prediction of the disulfide-bonding state of cysteines in proteins based on dipeptide composition.

Authors:  Jiang-Ning Song; Ming-Lei Wang; Wei-Jiang Li; Wen-Bo Xu
Journal:  Biochem Biophys Res Commun       Date:  2004-05-21       Impact factor: 3.575

Review 10.  Oxidative protein folding in eukaryotes: mechanisms and consequences.

Authors:  Benjamin P Tu; Jonathan S Weissman
Journal:  J Cell Biol       Date:  2004-02-02       Impact factor: 10.539

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  2 in total

1.  Mass measurement and top-down HPLC/MS analysis of intact monoclonal antibodies on a hybrid linear quadrupole ion trap-Orbitrap mass spectrometer.

Authors:  Pavel V Bondarenko; Tonya P Second; Vlad Zabrouskov; Alexander A Makarov; Zhongqi Zhang
Journal:  J Am Soc Mass Spectrom       Date:  2009-03-28       Impact factor: 3.109

Review 2.  Techniques for the analysis of cysteine sulfhydryls and oxidative protein folding.

Authors:  Chad R Borges; Nisha D Sherma
Journal:  Antioxid Redox Signal       Date:  2014-02-18       Impact factor: 8.401

  2 in total

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