Literature DB >> 18265309

Chromatin assembly using Drosophila systems.

Dmitry V Fyodorov1, Mark E Levenstein.   

Abstract

To successfully study chromatin structure and activity in vitro, it is essential to have a chromatin assembly system that will prepare extended nucleosome arrays with highly defined protein content that resemble bulk chromatin isolated from living cell nuclei in terms of periodicity and nucleosome positioning. The Drosophila ATP-dependent chromatin assembly system described in this unit meets these requirements. The end product of the reaction described here has highly periodic extended arrays with physiologic spacing and positioning of the nucleosomes.

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Year:  2002        PMID: 18265309     DOI: 10.1002/0471142727.mb2107s58

Source DB:  PubMed          Journal:  Curr Protoc Mol Biol        ISSN: 1934-3647


  8 in total

1.  Mi2beta shows chromatin enzyme specificity by erasing a DNase I-hypersensitive site established by ACF.

Authors:  Haruhiko Ishii; Hansen Du; Zhaoqing Zhang; Angus Henderson; Ranjan Sen; Michael J Pazin
Journal:  J Biol Chem       Date:  2009-01-21       Impact factor: 5.157

2.  A simple and versatile system for the ATP-dependent assembly of chromatin.

Authors:  Mai T Khuong; Jia Fei; Grisel Cruz-Becerra; James T Kadonaga
Journal:  J Biol Chem       Date:  2017-10-05       Impact factor: 5.157

3.  Reconstitution of Chromatin by Stepwise Salt Dialysis.

Authors:  Grisel Cruz-Becerra; James T Kadonaga
Journal:  Bio Protoc       Date:  2021-04-05

4.  The prenucleosome, a stable conformational isomer of the nucleosome.

Authors:  Jia Fei; Sharon E Torigoe; Christopher R Brown; Mai T Khuong; George A Kassavetis; Hinrich Boeger; James T Kadonaga
Journal:  Genes Dev       Date:  2015-12-15       Impact factor: 11.361

5.  Enhancement of homology-directed repair with chromatin donor templates in cells.

Authors:  Grisel Cruz-Becerra; James T Kadonaga
Journal:  Elife       Date:  2020-04-28       Impact factor: 8.140

6.  Reconstitution of Drosophila and human chromatins by wheat germ cell-free co-expression system.

Authors:  Kei-Ichi Okimune; Szilvia K Nagy; Shogo Hataya; Yaeta Endo; Taichi E Takasuka
Journal:  BMC Biotechnol       Date:  2020-12-01       Impact factor: 2.563

7.  CHD1 controls H3.3 incorporation in adult brain chromatin to maintain metabolic homeostasis and normal lifespan.

Authors:  Ines Schoberleitner; Ingo Bauer; Anming Huang; Evgeniya N Andreyeva; Johanna Sebald; Katharina Pascher; Dietmar Rieder; Melanie Brunner; Valerie Podhraski; Gregor Oemer; Daniel Cázarez-García; Leila Rieder; Markus A Keller; Robert Winkler; Dmitry V Fyodorov; Alexandra Lusser
Journal:  Cell Rep       Date:  2021-10-05       Impact factor: 9.423

8.  ATP-dependent chromatin assembly is functionally distinct from chromatin remodeling.

Authors:  Sharon E Torigoe; Ashok Patel; Mai T Khuong; Gregory D Bowman; James T Kadonaga
Journal:  Elife       Date:  2013-08-20       Impact factor: 8.140

  8 in total

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