Literature DB >> 18265096

Preparation of yeast RNA.

M A Collart1, S Oliviero.   

Abstract

This unit provides two protocols for extraction of RNA from yeast that differ primarily in the method for lysing the yeast cells. The first protocol isolates RNA directly from intact yeast cells by extraction with hot acidic phenol. This yields RNA that is relatively free of contaminating DNA, is convenient to perform with multiple samples, and gives little or no sample-to-sample variation. In contrast, an alternate protocol relies upon disruption of cells by vigorous mixing with glass beads and denaturing agents. Although this procedure results in efficient breaking of the cells, the product is associated with residual DNA, and the procedure itself is troublesome when one is working with multiple samples. A second alternate protocol describes the scaling up of the first two procedures to isolate enough total RNA for poly (A)+ RNA preparation.

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Year:  2001        PMID: 18265096     DOI: 10.1002/0471142727.mb1312s23

Source DB:  PubMed          Journal:  Curr Protoc Mol Biol        ISSN: 1934-3647


  114 in total

1.  Novel transcript truncating function of Rap1p revealed by synthetic codon-optimized Ty1 retrotransposon.

Authors:  Robert M Yarrington; Sarah M Richardson; Cheng Ran Lisa Huang; Jef D Boeke
Journal:  Genetics       Date:  2011-11-30       Impact factor: 4.562

2.  Mitotic exit control of the Saccharomyces cerevisiae Ndr/LATS kinase Cbk1 regulates daughter cell separation after cytokinesis.

Authors:  Jennifer Brace; Jonathan Hsu; Eric L Weiss
Journal:  Mol Cell Biol       Date:  2010-12-06       Impact factor: 4.272

3.  Derepression of INO1 transcription requires cooperation between the Ino2p-Ino4p heterodimer and Cbf1p and recruitment of the ISW2 chromatin-remodeling complex.

Authors:  Ameet Shetty; John M Lopes
Journal:  Eukaryot Cell       Date:  2010-10-08

4.  Activation of the Yeast UBI4 Polyubiquitin Gene by Zap1 Transcription Factor via an Intragenic Promoter Is Critical for Zinc-deficient Growth.

Authors:  Colin W MacDiarmid; Janet Taggart; Jeeyon Jeong; Kittikhun Kerdsomboon; David J Eide
Journal:  J Biol Chem       Date:  2016-07-18       Impact factor: 5.157

5.  Identification of histone mutants that are defective for transcription-coupled nucleosome occupancy.

Authors:  Sarah J Hainer; Joseph A Martens
Journal:  Mol Cell Biol       Date:  2011-07-05       Impact factor: 4.272

6.  A tRNA modification balances carbon and nitrogen metabolism by regulating phosphate homeostasis.

Authors:  Ritu Gupta; Adhish S Walvekar; Shun Liang; Zeenat Rashida; Premal Shah; Sunil Laxman
Journal:  Elife       Date:  2019-07-01       Impact factor: 8.140

7.  Intrinsically Disordered Proteins Drive Emergence and Inheritance of Biological Traits.

Authors:  Sohini Chakrabortee; James S Byers; Sandra Jones; David M Garcia; Bhupinder Bhullar; Amelia Chang; Richard She; Laura Lee; Brayon Fremin; Susan Lindquist; Daniel F Jarosz
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

8.  The histone H4 basic patch regulates SAGA-mediated H2B deubiquitination and histone acetylation.

Authors:  Hashem A Meriesh; Andrew M Lerner; Mahesh B Chandrasekharan; Brian D Strahl
Journal:  J Biol Chem       Date:  2020-04-03       Impact factor: 5.157

9.  Secretion of quinolinic acid, an intermediate in the kynurenine pathway, for utilization in NAD+ biosynthesis in the yeast Saccharomyces cerevisiae.

Authors:  Kazuto Ohashi; Shigeyuki Kawai; Kousaku Murata
Journal:  Eukaryot Cell       Date:  2013-03-01

10.  Morphogenic and genetic differences between Candida albicans strains are associated with keratomycosis virulence.

Authors:  Xia Hua; Xiaoyong Yuan; Bradley M Mitchell; Michael C Lorenz; Denis M O'Day; Kirk R Wilhelmus
Journal:  Mol Vis       Date:  2009-07-30       Impact factor: 2.367

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