Literature DB >> 18265084

Yeast one-hybrid screening for DNA-protein interactions.

P B Ouwerkerk1, A H Meijer.   

Abstract

One-hybrid screening in yeast is a powerful method to rapidly identify heterologous transcription factors that can interact with a specific regulatory DNA sequence of interest (the bait sequence). In this technique, the interaction between two proteins (bait and prey) is detected via in vivo reconstitution of a transcriptional activator that turns on expression of a reporter gene. Detection is based on the interaction of a transcription factor (prey) with a bait DNA sequence upstream of a reporter gene. To ensure that DNA binding results in reporter-gene activation, cDNA expression libraries are used to produce hybrids between the prey and a strong trans-activating domain. The advantage of cloning transcription factors or other DNA-binding proteins via one-hybrid screenings, compared to biochemical techniques, is that the procedure does not require specific optimization of in vitro conditions.

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Year:  2001        PMID: 18265084     DOI: 10.1002/0471142727.mb1212s55

Source DB:  PubMed          Journal:  Curr Protoc Mol Biol        ISSN: 1934-3647


  20 in total

1.  MYB46 modulates disease susceptibility to Botrytis cinerea in Arabidopsis.

Authors:  Vicente Ramírez; Astrid Agorio; Alberto Coego; Javier García-Andrade; M José Hernández; Begoña Balaguer; Pieter B F Ouwerkerk; Ignacio Zarra; Pablo Vera
Journal:  Plant Physiol       Date:  2011-01-31       Impact factor: 8.340

2.  Unraveling the Function of the Response Regulator BcSkn7 in the Stress Signaling Network of Botrytis cinerea.

Authors:  Anne Viefhues; Ina Schlathoelter; Adeline Simon; Muriel Viaud; Paul Tudzynski
Journal:  Eukaryot Cell       Date:  2015-05-01

3.  Detection of nucleic acid-protein interactions in plant leaves using fluorescence lifetime imaging microscopy.

Authors:  Laurent Camborde; Alain Jauneau; Christian Brière; Laurent Deslandes; Bernard Dumas; Elodie Gaulin
Journal:  Nat Protoc       Date:  2017-08-24       Impact factor: 13.491

4.  The VvWRKY37 Regulates Bud Break in Grape Vine Through ABA-Mediated Signaling Pathways.

Authors:  Feng-Pan Wang; Pan-Pan Zhao; Lei Zhang; Heng Zhai; Muhammad Abid; Yuan-Peng Du
Journal:  Front Plant Sci       Date:  2022-06-16       Impact factor: 6.627

5.  Rice phytochrome-interacting factor protein OsPIF14 represses OsDREB1B gene expression through an extended N-box and interacts preferentially with the active form of phytochrome B.

Authors:  André M Cordeiro; Duarte D Figueiredo; James Tepperman; Ana Rita Borba; Tiago Lourenço; Isabel A Abreu; Pieter B F Ouwerkerk; Peter H Quail; M Margarida Oliveira; Nelson J M Saibo
Journal:  Biochim Biophys Acta       Date:  2015-12-28

6.  Five novel transcription factors as potential regulators of OsNHX1 gene expression in a salt tolerant rice genotype.

Authors:  Diego M Almeida; Glenn B Gregorio; M Margarida Oliveira; Nelson J M Saibo
Journal:  Plant Mol Biol       Date:  2016-10-20       Impact factor: 4.076

7.  An approach for determining and measuring network hierarchy applied to comparing the phosphorylome and the regulome.

Authors:  Chao Cheng; Erik Andrews; Koon-Kiu Yan; Matthew Ung; Daifeng Wang; Mark Gerstein
Journal:  Genome Biol       Date:  2015-03-31       Impact factor: 13.583

8.  PPP1, a plant-specific regulator of transcription controls Arabidopsis development and PIN expression.

Authors:  René Benjamins; Elke Barbez; Martina Ortbauer; Inez Terpstra; Doris Lucyshyn; Jeanette Moulinier-Anzola; Muhammad Asaf Khan; Johannes Leitner; Nenad Malenica; Haroon Butt; Barbara Korbei; Ben Scheres; Jürgen Kleine-Vehn; Christian Luschnig
Journal:  Sci Rep       Date:  2016-08-24       Impact factor: 4.379

9.  Transcriptional repression of BODENLOS by HD-ZIP transcription factor HB5 in Arabidopsis thaliana.

Authors:  Ive De Smet; Steffen Lau; Jasmin S Ehrismann; Ioannis Axiotis; Martina Kolb; Marika Kientz; Dolf Weijers; Gerd Jürgens
Journal:  J Exp Bot       Date:  2013-05-16       Impact factor: 6.992

10.  Functions of OsDof25 in regulation of OsC4PPDK.

Authors:  Y Zhang; N I Verhoeff; Z Chen; S Chen; Mei Wang; Zhen Zhu; P B F Ouwerkerk
Journal:  Plant Mol Biol       Date:  2015-09-03       Impact factor: 4.076

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