Literature DB >> 18261476

Amidohydrolases of the reductive pyrimidine catabolic pathway purification, characterization, structure, reaction mechanisms and enzyme deficiency.

Klaus D Schnackerz1, Doreen Dobritzsch.   

Abstract

In the reductive pyrimidine catabolic pathway uracil and thymine are converted to beta-alanine and beta-aminoisobutyrate. The amidohydrolases of this pathway are responsible for both the ring opening of dihydrouracil and dihydrothymine (dihydropyrimidine amidohydrolase) and the hydrolysis of N-carbamyl-beta-alanine and N-carbamyl-beta-aminoisobutyrate (beta-alanine synthase). The review summarizes what is known about the properties, kinetic parameters, three-dimensional structures and reaction mechanisms of these proteins. The two amidohydrolases of the reductive pyrimidine catabolic pathway have unrelated folds, with dihydropyrimidine amidohydrolase belonging to the amidohydrolase superfamily while the beta-alanine synthase from higher eukaryotes belongs to the nitrilase superfamily. beta-Alanine synthase from Saccharomyces kluyveri is an exception to the rule and belongs to the Acyl/M20 family.

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Year:  2008        PMID: 18261476     DOI: 10.1016/j.bbapap.2008.01.005

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  7 in total

1.  Divergent functions through alternative splicing: the Drosophila CRMP gene in pyrimidine metabolism, brain, and behavior.

Authors:  Deanna H Morris; Josh Dubnau; Jae H Park; John M Rawls
Journal:  Genetics       Date:  2012-05-29       Impact factor: 4.562

2.  Evolution of cyclic amidohydrolases: a highly diversified superfamily.

Authors:  Matthieu Barba; Nicolas Glansdorff; Bernard Labedan
Journal:  J Mol Evol       Date:  2013-08-27       Impact factor: 2.395

3.  High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes.

Authors:  Thomas S Peat; Sahil Balotra; Matthew Wilding; Carol J Hartley; Janet Newman; Colin Scott
Journal:  Appl Environ Microbiol       Date:  2017-04-17       Impact factor: 4.792

4.  β-alanine biosynthesis in Methanocaldococcus jannaschii.

Authors:  Yu Wang; Huimin Xu; Robert H White
Journal:  J Bacteriol       Date:  2014-06-02       Impact factor: 3.490

5.  Inhibition of a Putative Dihydropyrimidinase from Pseudomonas aeruginosa PAO1 by Flavonoids and Substrates of Cyclic Amidohydrolases.

Authors:  Cheng-Yang Huang
Journal:  PLoS One       Date:  2015-05-19       Impact factor: 3.240

6.  Structural Basis for pH-Dependent Oligomerization of Dihydropyrimidinase from Pseudomonas aeruginosa PAO1.

Authors:  Jen-Hao Cheng; Chien-Chih Huang; Yen-Hua Huang; Cheng-Yang Huang
Journal:  Bioinorg Chem Appl       Date:  2018-01-30       Impact factor: 7.778

7.  Identification of Oxygen-Independent Pathways for Pyridine Nucleotide and Coenzyme A Synthesis in Anaerobic Fungi by Expression of Candidate Genes in Yeast.

Authors:  Thomas Perli; Aurin M Vos; Jonna Bouwknegt; Wijb J C Dekker; Sanne J Wiersma; Christiaan Mooiman; Raúl A Ortiz-Merino; Jean-Marc Daran; Jack T Pronk
Journal:  mBio       Date:  2021-06-22       Impact factor: 7.867

  7 in total

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