Literature DB >> 18249461

Evolution of gene sequence and gene expression are not correlated in yeast.

Itay Tirosh1, Naama Barkai.   

Abstract

We show that, in yeast, the divergence rate of gene expression is not correlated with that of its associated coding sequence. Gene essentiality influences both modes of evolution, but other properties related to protein structure or promoter composition are only correlated with coding-sequence divergence or gene expression divergence, respectively. Based on these findings, we discuss the possibilities of neutral evolution of gene expression and of different modes of evolution in unicellular versus multicellular organisms.

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Year:  2008        PMID: 18249461     DOI: 10.1016/j.tig.2007.12.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  38 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-05       Impact factor: 11.205

2.  Degree dependence in rates of transcription factor evolution explains the unusual structure of transcription networks.

Authors:  Alexander J Stewart; Robert M Seymour; Andrew Pomiankowski
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3.  Evolution of sex-dependent gene expression in three recently diverged species of Drosophila.

Authors:  Zi-Feng Jiang; Carlos A Machado
Journal:  Genetics       Date:  2009-08-31       Impact factor: 4.562

4.  High-resolution mapping of cis-regulatory variation in budding yeast.

Authors:  Ryosuke Kita; Sandeep Venkataram; Yiqi Zhou; Hunter B Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-28       Impact factor: 11.205

5.  Slow protein evolutionary rates are dictated by surface-core association.

Authors:  Agnes Tóth-Petróczy; Dan S Tawfik
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-20       Impact factor: 11.205

6.  Extensive divergence of yeast stress responses through transitions between induced and constitutive activation.

Authors:  Itay Tirosh; Koon Ho Wong; Naama Barkai; Kevin Struhl
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

7.  The fate of gene duplicates in the genomes of fungal pathogens.

Authors:  Pari Skamnioti; Rebecca F Furlong; Sarah J Gurr
Journal:  Commun Integr Biol       Date:  2008

8.  Variation in gene duplicates with low synonymous divergence in Saccharomyces cerevisiae relative to Caenorhabditis elegans.

Authors:  Vaishali Katju; James C Farslow; Ulfar Bergthorsson
Journal:  Genome Biol       Date:  2009-07-13       Impact factor: 13.583

9.  Positive selection for elevated gene expression noise in yeast.

Authors:  Zhihua Zhang; Wenfeng Qian; Jianzhi Zhang
Journal:  Mol Syst Biol       Date:  2009-08-18       Impact factor: 11.429

10.  A comprehensive analysis of gene expression evolution between humans and mice.

Authors:  Yupeng Wang; Romdhane Rekaya
Journal:  Evol Bioinform Online       Date:  2009-07-06       Impact factor: 1.625

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