Literature DB >> 18249089

Improved mapping of information distribution across the cortical surface with the support vector machine.

Youping Xiao1, Ravi Rao, Guillermo Cecchi, Ehud Kaplan.   

Abstract

The early visual cortices represent information of several stimulus attributes, such as orientation and color. To understand the coding mechanisms of these attributes in the brain, and the functional organization of the early visual cortices, it is necessary to determine whether different attributes are represented by different compartments within each cortex. Previous studies addressing this question have focused on the information encoded by the response amplitude of individual neurons or cortical columns, and have reached conflicting conclusions. Given the correlated variability in response amplitude across neighboring columns, it is likely that the spatial pattern of responses across these columns encodes the attribute information more reliably than does the response amplitude. Here we present a new method of mapping the spatial distribution of information that is encoded by both the response amplitude and the spatial pattern. This new method is based on a statistical learning approach, the Support Vector Machine (SVM). Application of this new method to our optical imaging data suggests that information about stimulus orientation and color are distributed differently in the striate cortex, and this observation is consistent with the hypothesis of segregated representations of orientation and color in this area. We also demonstrate that SVM can be used to extract "single-condition" activation maps from noisy images of intrinsic optical signals.

Mesh:

Year:  2008        PMID: 18249089      PMCID: PMC2396954          DOI: 10.1016/j.neunet.2007.12.022

Source DB:  PubMed          Journal:  Neural Netw        ISSN: 0893-6080


  22 in total

1.  Low response variability in simultaneously recorded retinal, thalamic, and cortical neurons.

Authors:  P Kara; P Reinagel; R C Reid
Journal:  Neuron       Date:  2000-09       Impact factor: 17.173

2.  An optimization approach to signal extraction from noisy multivariate data.

Authors:  T Yokoo; B W Knight; L Sirovich
Journal:  Neuroimage       Date:  2001-12       Impact factor: 6.556

3.  A spatially organized representation of colour in macaque cortical area V2.

Authors:  Youping Xiao; Yi Wang; Daniel J Felleman
Journal:  Nature       Date:  2003-01-30       Impact factor: 49.962

4.  Classifying brain states and determining the discriminating activation patterns: Support Vector Machine on functional MRI data.

Authors:  Janaina Mourão-Miranda; Arun L W Bokde; Christine Born; Harald Hampel; Martin Stetter
Journal:  Neuroimage       Date:  2005-11-04       Impact factor: 6.556

5.  High response reliability of neurons in primary visual cortex (V1) of alert, trained monkeys.

Authors:  Moshe Gur; D Max Snodderly
Journal:  Cereb Cortex       Date:  2005-09-08       Impact factor: 5.357

6.  Hue maps in primate striate cortex.

Authors:  Youping Xiao; Alexander Casti; Jun Xiao; Ehud Kaplan
Journal:  Neuroimage       Date:  2006-12-22       Impact factor: 6.556

7.  V2 thin stripes contain spatially organized representations of achromatic luminance change.

Authors:  Yi Wang; Youping Xiao; Daniel J Felleman
Journal:  Cereb Cortex       Date:  2006-02-08       Impact factor: 5.357

8.  Dynamics of ongoing activity: explanation of the large variability in evoked cortical responses.

Authors:  A Arieli; A Sterkin; A Grinvald; A Aertsen
Journal:  Science       Date:  1996-09-27       Impact factor: 47.728

9.  Orientation selectivity in pinwheel centers in cat striate cortex.

Authors:  P E Maldonado; I Gödecke; C M Gray; T Bonhoeffer
Journal:  Science       Date:  1997-06-06       Impact factor: 47.728

10.  Reading hidden intentions in the human brain.

Authors:  John-Dylan Haynes; Katsuyuki Sakai; Geraint Rees; Sam Gilbert; Chris Frith; Richard E Passingham
Journal:  Curr Biol       Date:  2007-02-08       Impact factor: 10.834

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  13 in total

1.  Spatial structure of neuronal receptive field in awake monkey secondary visual cortex (V2).

Authors:  Lu Liu; Liang She; Ming Chen; Tianyi Liu; Haidong D Lu; Yang Dan; Mu-ming Poo
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-02       Impact factor: 11.205

2.  Quantification of optical images of cortical responses for inferring functional maps.

Authors:  Gopathy Purushothaman; Ilya Khaytin; Vivien A Casagrande
Journal:  J Neurophysiol       Date:  2009-02-18       Impact factor: 2.714

3.  The Representation of Orientation in Macaque V2: Four Stripes Not Three.

Authors:  Daniel J Felleman; Heejin Lim; Youping Xiao; Yi Wang; Anastasia Eriksson; Arun Parajuli
Journal:  Cereb Cortex       Date:  2014-03-09       Impact factor: 5.357

4.  An Orientation Map for Motion Boundaries in Macaque V2.

Authors:  Ming Chen; Peichao Li; Shude Zhu; Chao Han; Haoran Xu; Yang Fang; Jiaming Hu; Anna W Roe; Haidong D Lu
Journal:  Cereb Cortex       Date:  2014-09-26       Impact factor: 5.357

5.  Statistics of natural scenes and cortical color processing.

Authors:  Guillermo A Cecchi; A Ravishankar Rao; Youping Xiao; Ehud Kaplan
Journal:  J Vis       Date:  2010-09-01       Impact factor: 2.240

6.  Function-specific projections from V2 to V4 in macaques.

Authors:  Chen Fang; Kun Yan; Chen Liang; Jiayu Wang; Xingya Cai; Rui Zhang; Haidong D Lu
Journal:  Brain Struct Funct       Date:  2022-01-03       Impact factor: 3.270

7.  Analytic estimation of statistical significance maps for support vector machine based multi-variate image analysis and classification.

Authors:  Bilwaj Gaonkar; Christos Davatzikos
Journal:  Neuroimage       Date:  2013-04-10       Impact factor: 6.556

8.  Curvature-processing domains in primate V4.

Authors:  Rendong Tang; Qianling Song; Ying Li; Rui Zhang; Xingya Cai; Haidong D Lu
Journal:  Elife       Date:  2020-11-19       Impact factor: 8.140

9.  Interpreting support vector machine models for multivariate group wise analysis in neuroimaging.

Authors:  Bilwaj Gaonkar; Russell T Shinohara; Christos Davatzikos
Journal:  Med Image Anal       Date:  2015-06-25       Impact factor: 8.545

10.  Rivalry-Like Neural Activity in Primary Visual Cortex in Anesthetized Monkeys.

Authors:  Haoran Xu; Chao Han; Ming Chen; Peichao Li; Shude Zhu; Yang Fang; Jiaming Hu; Heng Ma; Haidong D Lu
Journal:  J Neurosci       Date:  2016-03-16       Impact factor: 6.167

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