Literature DB >> 18246302

A modified DNA isolation protocol for obtaining pure RT-PCR grade RNA.

Roland Klassen1, Julia Fricke, Annika Pfeiffer, Friedhelm Meinhardt.   

Abstract

We provide a simple but very efficient method for RNA preparation from Saccharomyces cerevisiae based on a standard chromosomal DNA isolation protocol. The method yields DNA-free total RNA, including mRNA, rRNA, and tRNA but can easily be adjusted to considerably enrich low molecular weight RNAs, such as tRNAs and the small rRNA species (5S and 5.8S). The procedure was proven and validated by verification of cDNAs belonging to four different genes, two of which encoding polypeptides and two tRNA genes. Besides its simplicity, the method is further advantageous in terms of safety (omitting hazardous phenol) and cost efficiency.

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Year:  2008        PMID: 18246302     DOI: 10.1007/s10529-008-9648-y

Source DB:  PubMed          Journal:  Biotechnol Lett        ISSN: 0141-5492            Impact factor:   2.461


  6 in total

1.  Site-directed mutagenesis of the heterotrimeric killer toxin zymocin identifies residues required for early steps in toxin action.

Authors:  Sabrina Wemhoff; Roland Klassen; Friedhelm Meinhardt
Journal:  Appl Environ Microbiol       Date:  2014-08-15       Impact factor: 4.792

2.  Immunity factors for two related tRNAGln targeting killer toxins distinguish cognate and non-cognate toxic subunits.

Authors:  Roland Klassen; Alene Kast; Guido Wünsche; John P Paluszynski; Sabrina Wemhoff; Friedhelm Meinhardt
Journal:  Curr Genet       Date:  2014-04-10       Impact factor: 3.886

3.  A fungal anticodon nuclease ribotoxin exploits a secondary cleavage site to evade tRNA repair.

Authors:  Birthe Meineke; Alene Kast; Beate Schwer; Friedhelm Meinhardt; Stewart Shuman; Roland Klassen
Journal:  RNA       Date:  2012-07-26       Impact factor: 4.942

4.  One-step hot formamide extraction of RNA from Saccharomyces cerevisiae.

Authors:  Daniel Shedlovskiy; Natalia Shcherbik; Dimitri G Pestov
Journal:  RNA Biol       Date:  2017-07-31       Impact factor: 4.652

5.  Accurate RNA consensus sequencing for high-fidelity detection of transcriptional mutagenesis-induced epimutations.

Authors:  Kate S Reid-Bayliss; Lawrence A Loeb
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-10       Impact factor: 11.205

6.  RNA preparation of Saccharomyces cerevisiae using the digestion method may give misleading results.

Authors:  Tadahiro Suzuki; Yumiko Iwahashi
Journal:  Appl Biochem Biotechnol       Date:  2013-01-17       Impact factor: 2.926

  6 in total

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