Literature DB >> 18246107

Once in a lifetime: strategies for preventing re-replication in prokaryotic and eukaryotic cells.

Olaf Nielsen1, Anders Løbner-Olesen.   

Abstract

DNA replication is an extremely accurate process and cells have evolved intricate control mechanisms to ensure that each region of their genome is replicated only once during S phase. Here, we compare what is known about the processes that prevent re-replication in prokaryotic and eukaryotic cells by using the model organisms Escherichia coli and Schizosaccharomyces pombe as examples. Although the underlying molecular details are different, the logic behind the control mechanisms is similar. For example, after initiation, crucial molecules required for the loading of replicative helicases in both prokaryotes and eukaryotes are inactivated until the next cell cycle. Furthermore, in both systems the beta-clamp of the replicative polymerase associates with enzymatic activities that contribute to the inactivation of the helicase loaders. Finally, recent studies suggest that the control mechanism that prevents re-replication in both systems also increases the synthesis of DNA building blocks.

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Year:  2008        PMID: 18246107      PMCID: PMC2246403          DOI: 10.1038/sj.embor.2008.2

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  55 in total

1.  Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli.

Authors:  K Kurokawa; S Nishida; A Emoto; K Sekimizu; T Katayama
Journal:  EMBO J       Date:  1999-12-01       Impact factor: 11.598

2.  The eclipse period of Escherichia coli.

Authors:  U von Freiesleben; M A Krekling; F G Hansen; A Løbner-Olesen
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

3.  A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo.

Authors:  Satoshi Nishida; Kazuyuki Fujimitsu; Kazuhisa Sekimizu; Tadahiro Ohmura; Tadashi Ueda; Tsutomu Katayama
Journal:  J Biol Chem       Date:  2002-02-11       Impact factor: 5.157

4.  Cyclin-dependent kinases prevent DNA re-replication through multiple mechanisms.

Authors:  V Q Nguyen; C Co; J J Li
Journal:  Nature       Date:  2001-06-28       Impact factor: 49.962

5.  IHF and HU stimulate assembly of pre-replication complexes at Escherichia coli oriC by two different mechanisms.

Authors:  Valorie T Ryan; Julia E Grimwade; Christian J Nievera; Alan C Leonard
Journal:  Mol Microbiol       Date:  2002-10       Impact factor: 3.501

6.  The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation.

Authors:  Jan P Erzberger; Michelle M Pirruccello; James M Berger
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

7.  Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA.

Authors:  C Speck; W Messer
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

8.  Control of DNA rereplication via Cdc2 phosphorylation sites in the origin recognition complex.

Authors:  A Vas; W Mok; J Leatherwood
Journal:  Mol Cell Biol       Date:  2001-09       Impact factor: 4.272

9.  Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli.

Authors:  J Kato ; T Katayama
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

10.  A novel regulatory mechanism couples deoxyribonucleotide synthesis and DNA replication in Escherichia coli.

Authors:  Stéphanie Gon; Johanna E Camara; Hege K Klungsøyr; Elliott Crooke; Kirsten Skarstad; Jon Beckwith
Journal:  EMBO J       Date:  2006-02-16       Impact factor: 11.598

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  20 in total

1.  Replication initiator DnaA of Escherichia coli changes its assembly form on the replication origin during the cell cycle.

Authors:  Shingo Nozaki; Hironori Niki; Tohru Ogawa
Journal:  J Bacteriol       Date:  2009-06-05       Impact factor: 3.490

2.  Transition from a plasmid to a chromosomal mode of replication entails additional regulators.

Authors:  Tatiana Venkova-Canova; Dhruba K Chattoraj
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

3.  Inevitability and containment of replication errors for eukaryotic genome lengths spanning megabase to gigabase.

Authors:  Mohammed Al Mamun; Luca Albergante; Alberto Moreno; James T Carrington; J Julian Blow; Timothy J Newman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-14       Impact factor: 11.205

Review 4.  Fundamental principles in bacterial physiology-history, recent progress, and the future with focus on cell size control: a review.

Authors:  Suckjoon Jun; Fangwei Si; Rami Pugatch; Matthew Scott
Journal:  Rep Prog Phys       Date:  2018-01-09

5.  Genome-wide detection of chromosomal rearrangements, indels, and mutations in circular chromosomes by short read sequencing.

Authors:  Ole Skovgaard; Mads Bak; Anders Løbner-Olesen; Niels Tommerup
Journal:  Genome Res       Date:  2011-05-09       Impact factor: 9.043

Review 6.  Roles of DNA adenine methylation in host-pathogen interactions: mismatch repair, transcriptional regulation, and more.

Authors:  Martin G Marinus; Josep Casadesus
Journal:  FEMS Microbiol Rev       Date:  2009-01-19       Impact factor: 16.408

7.  DNA adenine methylation is required to replicate both Vibrio cholerae chromosomes once per cell cycle.

Authors:  Gaëlle Demarre; Dhruba K Chattoraj
Journal:  PLoS Genet       Date:  2010-05-06       Impact factor: 5.917

8.  Protein and DNA effectors control the TraI conjugative helicase of plasmid R1.

Authors:  Marta V Sut; Sanja Mihajlovic; Silvia Lang; Christian J Gruber; Ellen L Zechner
Journal:  J Bacteriol       Date:  2009-09-18       Impact factor: 3.490

9.  The right half of the Escherichia coli replication origin is not essential for viability, but facilitates multi-forked replication.

Authors:  Nicholas Stepankiw; Akihiro Kaidow; Erik Boye; David Bates
Journal:  Mol Microbiol       Date:  2009-09-08       Impact factor: 3.501

10.  DnaAcos hyperinitiates by circumventing regulatory pathways that control the frequency of initiation in Escherichia coli.

Authors:  Magdalena M Felczak; Jon M Kaguni
Journal:  Mol Microbiol       Date:  2009-04-30       Impact factor: 3.501

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