Literature DB >> 18236037

Force-induced structural transitions in cross-linked DNA films.

A André1, F Fontaine-Vive, H M Möller, T Fischer, G Maret, V T Forsyth, T Gisler.   

Abstract

We report on the preparation and characterization of wet-spun films of sodium DNA in which intermolecular cross-links were introduced following formaldehyde treatment. Raman scattering shows that the DNA in moderately cross-linked films is mainly in the B conformation. Stretching experiments show a transition from plastic to elastomeric behavior with increasing exposure to the cross-linking agent. Elastomeric DNA films are strongly disordered. X-ray diffraction shows that stretching of moderately cross-linked films under controlled high humidity conditions results in increased molecular orientation as well as the appearance of meridional reflections at 7.4-7.8 and 8.2 angstroms. These reflections are not observed for any of the classical conformations associated with mixed sequence DNA, and may arise from extended base-pair stacking in a stretched DNA structure.

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Year:  2008        PMID: 18236037     DOI: 10.1007/s00249-008-0257-4

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  38 in total

1.  Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads.

Authors:  S B Smith; L Finzi; C Bustamante
Journal:  Science       Date:  1992-11-13       Impact factor: 47.728

2.  Preparation of oriented DNA in large amounts.

Authors:  A RUPPRECHT
Journal:  Biochem Biophys Res Commun       Date:  1963-07-18       Impact factor: 3.575

3.  Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules.

Authors:  S B Smith; Y Cui; C Bustamante
Journal:  Science       Date:  1996-02-09       Impact factor: 47.728

4.  Measurement of DNA length by gel electrophoresis.

Authors:  E M Southern
Journal:  Anal Biochem       Date:  1979-12       Impact factor: 3.365

5.  Preparation of oriented DNA by wet spinning.

Authors:  A Rupprecht
Journal:  Acta Chem Scand       Date:  1966

6.  DNA stretching and compression: large-scale simulations of double helical structures.

Authors:  K M Kosikov; A A Gorin; V B Zhurkin; W K Olson
Journal:  J Mol Biol       Date:  1999-06-25       Impact factor: 5.469

7.  Effect of formalin fixation on the near-infrared Raman spectroscopy of normal and cancerous human bronchial tissues.

Authors:  Zhiwei Huang; Annette McWilliams; Stephen Lam; John English; David I McLean; Harvey Lui; Haishan Zeng
Journal:  Int J Oncol       Date:  2003-09       Impact factor: 5.650

8.  Rapid isolation, hydrolysis and chromatography of formaldehyde-modified DNA.

Authors:  F A Beland; N F Fullerton; R H Heflich
Journal:  J Chromatogr       Date:  1984-06-08

Review 9.  Water-DNA interactions as studied by X-ray and neutron fibre diffraction.

Authors:  Watson Fuller; Trevor Forsyth; Arumugam Mahendrasingam
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

10.  Structure and energy of a DNA dodecamer under tensile load.

Authors:  Stefano Piana
Journal:  Nucleic Acids Res       Date:  2005-12-14       Impact factor: 16.971

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