Literature DB >> 18235431

MAPAS: a tool for predicting membrane-contacting protein surfaces.

Yuriy Sharikov, Ross C Walker, Jerry Greenberg, Valentina Kouznetsova, Sanjay K Nigam, Mark A Miller, Eliezer Masliah, Igor F Tsigelny.   

Abstract

Mesh：

Substances：

Year:  2008        PMID： 18235431     DOI： 10.1038/nmeth0208-119

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


× No keyword cloud information.
  11 in total

1.  Molecular determinants of α-synuclein mutants' oligomerization and membrane interactions.

Authors:  Igor F Tsigelny; Yuriy Sharikov; Valentina L Kouznetsova; Jerry P Greenberg; Wolf Wrasidlo; Cassia Overk; Tania Gonzalez; Margarita Trejo; Brian Spencer; Kori Kosberg; Eliezer Masliah
Journal:  ACS Chem Neurosci       Date:  2015-01-21       Impact factor: 4.418

2.  Role of α-synuclein penetration into the membrane in the mechanisms of oligomer pore formation.

Authors:  Igor F Tsigelny; Yuriy Sharikov; Wolfgang Wrasidlo; Tania Gonzalez; Paula A Desplats; Leslie Crews; Brian Spencer; Eliezer Masliah
Journal:  FEBS J       Date:  2012-02-27       Impact factor: 5.542

3.  Predicting protein-membrane interfaces of peripheral membrane proteins using ensemble machine learning.

Authors:  Alexios Chatzigoulas; Zoe Cournia
Journal:  Brief Bioinform       Date:  2022-03-10       Impact factor: 11.622

4.  Crystal structure of human plasma platelet-activating factor acetylhydrolase: structural implication to lipoprotein binding and catalysis.

Authors:  Uttamkumar Samanta; Brian J Bahnson
Journal:  J Biol Chem       Date:  2008-09-10       Impact factor: 5.157

5.  Modeling of glycerol-3-phosphate transporter suggests a potential 'tilt' mechanism involved in its function.

Authors:  Igor F Tsigelny; Jerry Greenberg; Valentina Kouznetsova; Sanjay K Nigam
Journal:  J Bioinform Comput Biol       Date:  2008-10       Impact factor: 1.122

6.  Mechanism of alpha-synuclein oligomerization and membrane interaction: theoretical approach to unstructured proteins studies.

Authors:  Igor F Tsigelny; Yuriy Sharikov; Mark A Miller; Eliezer Masliah
Journal:  Nanomedicine       Date:  2008-07-18       Impact factor: 5.307

7.  An all-atom model of the structure of human copper transporter 1.

Authors:  Igor F Tsigelny; Yuriy Sharikov; Jerry P Greenberg; Mark A Miller; Valentina L Kouznetsova; Christopher A Larson; Stephen B Howell
Journal:  Cell Biochem Biophys       Date:  2012-07       Impact factor: 2.194

8.  Structural diversity of Alzheimer's disease amyloid-β dimers and their role in oligomerization and fibril formation.

Authors:  Igor F Tsigelny; Yuriy Sharikov; Valentina L Kouznetsova; Jerry P Greenberg; Wolfgang Wrasidlo; Tania Gonzalez; Paula Desplats; Sarah E Michael; Margarita Trejo-Morales; Cassia R Overk; Eliezer Masliah
Journal:  J Alzheimers Dis       Date:  2014       Impact factor: 4.472

9.  OPM database and PPM web server: resources for positioning of proteins in membranes.

Authors:  Mikhail A Lomize; Irina D Pogozheva; Hyeon Joo; Henry I Mosberg; Andrei L Lomize
Journal:  Nucleic Acids Res       Date:  2011-09-02       Impact factor: 16.971

10.  Mechanisms of hybrid oligomer formation in the pathogenesis of combined Alzheimer's and Parkinson's diseases.

Authors:  Igor F Tsigelny; Leslie Crews; Paula Desplats; Gideon M Shaked; Yuriy Sharikov; Hideya Mizuno; Brian Spencer; Edward Rockenstein; Margarita Trejo; Oleksandr Platoshyn; Jason X-J Yuan; Eliezer Masliah
Journal:  PLoS One       Date:  2008-09-04       Impact factor: 3.240
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.