Literature DB >> 18234670

Identifying the minimal copper- and zinc-binding site sequence in amyloid-beta peptides.

Velia Minicozzi1, Francesco Stellato, Massimiliano Comai, Mauro Dalla Serra, Cristina Potrich, Wolfram Meyer-Klaucke, Silvia Morante.   

Abstract

With a combination of complementary experimental techniques, namely sedimentation assay, Fourier transform infrared spectroscopy, and x-ray absorption spectroscopy, we are able to determine the atomic structure around the metal-binding site in samples where amyloid-beta (Abeta) peptides are complexed with either Cu(II) or Zn(II). Exploiting information obtained on a selected set of fragments of the Abeta peptide, we identify along the sequence the histidine residues coordinated to the metal in the various peptides we have studied (Abeta(1-40), Abeta(1-16), Abeta(1-28), Abeta(5-23), and Abeta(17-40)). Our data can be consistently interpreted assuming that all of the peptides encompassing the minimal 1-16 amino acidic sequence display a copper coordination mode that involves three histidines (His(6), His(13), and His(14)). In zinc-Abeta complexes, despite the fact that the metal coordination appears to be more sensitive to solution condition and shows a less rigid geometry around the binding site, a four-histidine coordination mode is seen to be preferred. Lacking a fourth histidine along the Abeta peptide sequence, this geometrical arrangement hints at a Zn(II)-promoted interpeptide aggregation mode.

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Year:  2008        PMID: 18234670     DOI: 10.1074/jbc.M707109200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  57 in total

1.  Intra-membrane oligomerization and extra-membrane oligomerization of amyloid-β peptide are competing processes as a result of distinct patterns of motif interplay.

Authors:  Yi-Jiong Zhang; Jing-Ming Shi; Cai-Juan Bai; Han Wang; Hai-Yun Li; Yi Wu; Shang-Rong Ji
Journal:  J Biol Chem       Date:  2011-11-21       Impact factor: 5.157

2.  Zinc ions promote Alzheimer Abeta aggregation via population shift of polymorphic states.

Authors:  Yifat Miller; Buyong Ma; Ruth Nussinov
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-06       Impact factor: 11.205

3.  Calorimetric investigation of copper(II) binding to Aβ peptides: thermodynamics of coordination plasticity.

Authors:  Cristina Sacco; Rachel A Skowronsky; Sunitha Gade; John M Kenney; Anne M Spuches
Journal:  J Biol Inorg Chem       Date:  2012-01-22       Impact factor: 3.358

4.  The effect of Cu(2+) and Zn(2+) on the Aβ42 peptide aggregation and cellular toxicity.

Authors:  Anuj K Sharma; Stephanie T Pavlova; Jaekwang Kim; Jungsu Kim; Liviu M Mirica
Journal:  Metallomics       Date:  2013-11       Impact factor: 4.526

5.  Zinc modulates copper coordination mode in prion protein octa-repeat subdomains.

Authors:  Francesco Stellato; Ann Spevacek; Olivier Proux; Velia Minicozzi; Glenn Millhauser; Silvia Morante
Journal:  Eur Biophys J       Date:  2011-06-28       Impact factor: 1.733

6.  Combining conformational sampling and selection to identify the binding mode of zinc-bound amyloid peptides with bifunctional molecules.

Authors:  Liang Xu; Ke Gao; Chunyu Bao; Xicheng Wang
Journal:  J Comput Aided Mol Des       Date:  2012-07-25       Impact factor: 3.686

7.  Characterization of the internal dynamics and conformational space of zinc-bound amyloid β peptides by replica-exchange molecular dynamics simulations.

Authors:  Liang Xu; Xiaojuan Wang; Xicheng Wang
Journal:  Eur Biophys J       Date:  2013-05-03       Impact factor: 1.733

8.  Zn(++) binding disrupts the Asp(23)-Lys(28) salt bridge without altering the hairpin-shaped cross-β Structure of Aβ(42) amyloid aggregates.

Authors:  Venus Singh Mithu; Bidyut Sarkar; Debanjan Bhowmik; Muralidharan Chandrakesan; Sudipta Maiti; Perunthiruthy K Madhu
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

9.  Dynamical Oligomerisation of Histidine Rich Intrinsically Disordered ProteinS Is Regulated through Zinc-Histidine Interactions.

Authors:  Carolina Cragnell; Lasse Staby; Samuel Lenton; Birthe B Kragelund; Marie Skepö
Journal:  Biomolecules       Date:  2019-04-30

Review 10.  Polymorphism in Alzheimer Abeta amyloid organization reflects conformational selection in a rugged energy landscape.

Authors:  Yifat Miller; Buyong Ma; Ruth Nussinov
Journal:  Chem Rev       Date:  2010-08-11       Impact factor: 60.622

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