Literature DB >> 18234218

A structural basis for loop C-sheet polymerization in serpins.

Qingwei Zhang1, Ruby H P Law, Stephen P Bottomley, James C Whisstock, Ashley M Buckle.   

Abstract

In this study, we report the X-ray crystal structure of an N-terminally truncated variant of the bacterial serpin, tengpin (tengpinDelta42). Our data reveal that tengpinDelta42 adopts a variation of the latent conformation in which the reactive center loop is hyperinserted into the A beta-sheet and removed from the vicinity of the C-sheet. This conformational change leaves the C beta-sheet completely exposed and permits antiparallel edge-strand interactions between the exposed portion of the reactive center loop of one molecule and strand s2C of the C beta-sheet of the neighboring molecule in the crystal lattice. Our structural data thus reveal that tengpinDelta42 forms a loop C-sheet polymer in the crystal lattice. In vivo serpins have a propensity to misfold and form long-chain polymers, a process that underlies serpinopathies such as emphysema, thrombosis and dementia. Native serpins are thought to polymerize via a loop A-sheet mechanism. However, studies on plasminogen activator inhibitor 1 and the S49P variant of human neuroserpin reveal that the latent form of these molecules can also polymerize. Polymerization of latent neuroserpin may be important for the development of familial encephalopathy with neuroserpin inclusion bodies. Our structural data provide a possible mechanism for polymerization by latent serpins.

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Year:  2008        PMID: 18234218     DOI: 10.1016/j.jmb.2007.12.050

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

1.  Metals affect the structure and activity of human plasminogen activator inhibitor-1. I. Modulation of stability and protease inhibition.

Authors:  Lawrence C Thompson; Sumit Goswami; David S Ginsberg; Duane E Day; Ingrid M Verhamme; Cynthia B Peterson
Journal:  Protein Sci       Date:  2011-02       Impact factor: 6.725

2.  The structural basis of serpin polymerization studied by hydrogen/deuterium exchange and mass spectrometry.

Authors:  Yuko Tsutsui; Barbara Kuri; Tanusree Sengupta; Patrick L Wintrode
Journal:  J Biol Chem       Date:  2008-09-15       Impact factor: 5.157

3.  Two latent and two hyperstable polymeric forms of human neuroserpin.

Authors:  Stefano Ricagno; Margherita Pezzullo; Alberto Barbiroli; Mauro Manno; Matteo Levantino; Maria Grazia Santangelo; Francesco Bonomi; Martino Bolognesi
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

4.  A structure-derived snap-trap mechanism of a multispecific serpin from the dysbiotic human oral microbiome.

Authors:  Theodoros Goulas; Miroslaw Ksiazek; Irene Garcia-Ferrer; Alicja M Sochaj-Gregorczyk; Irena Waligorska; Marcin Wasylewski; Jan Potempa; F Xavier Gomis-Rüth
Journal:  J Biol Chem       Date:  2017-05-16       Impact factor: 5.157

5.  Energy landscapes of functional proteins are inherently risky.

Authors:  Anne Gershenson; Lila M Gierasch; Annalisa Pastore; Sheena E Radford
Journal:  Nat Chem Biol       Date:  2014-11       Impact factor: 15.040

6.  Characterising the association of latency with α(1)-antitrypsin polymerisation using a novel monoclonal antibody.

Authors:  Lu Tan; Juan Perez; Marianna Mela; Elena Miranda; Keith A Burling; Farshid N Rouhani; Dawn L DeMeo; Imran Haq; James A Irving; Adriana Ordóñez; Jennifer A Dickens; Mark Brantly; Stefan J Marciniak; Graeme J M Alexander; Bibek Gooptu; David A Lomas
Journal:  Int J Biochem Cell Biol       Date:  2014-11-13       Impact factor: 5.085

7.  Pnserpin: A Novel Serine Protease Inhibitor from Extremophile Pyrobaculum neutrophilum.

Authors:  Huan Zhang; Rui Fei; Baigong Xue; Shanshan Yu; Zuoming Zhang; Sheng Zhong; Yuanqi Gao; Xiaoli Zhou
Journal:  Int J Mol Sci       Date:  2017-01-07       Impact factor: 5.923

8.  AFM Imaging Reveals Topographic Diversity of Wild Type and Z Variant Polymers of Human α1-Proteinase Inhibitor.

Authors:  Maria Gaczynska; Przemyslaw Karpowicz; Christine E Stuart; Malgorzata G Norton; Jeffrey H Teckman; Ewa Marszal; Pawel A Osmulski
Journal:  PLoS One       Date:  2016-03-23       Impact factor: 3.240

  8 in total

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