Literature DB >> 18233873

Theory of conformational transitions of viral shells.

Thomas Guérin1, Robijn Bruinsma.   

Abstract

We propose a continuum theory for the conformational transitions of viral shells. Conformational transitions of viral shells, as encountered during viral maturation, are associated with a soft mode instability of the capsid proteins [F. Tama and C. L. Brooks, J. Mol. Biol. 345(2), 299 (2005)]. The continuum theory presented here is an adaptation of the Ginzburg-Landau theory of soft-mode structural phase transitions of solids to viral shells. The theory predicts that the conformational transitions are characterized by a pronounced softening of the shell elasticity in the critical region. We demonstrate that the thermodynamics of the conformational transition can be probed quantitatively by a micromechanical atomic force microscope study. The external force can drive a capsid into a state of phase coexistence characterized by a highly nonlinear force deformation curve.

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Year:  2007        PMID: 18233873     DOI: 10.1103/PhysRevE.76.061911

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  9 in total

1.  Determination of viral capsid elastic properties from equilibrium thermal fluctuations.

Authors:  Eric R May; Charles L Brooks
Journal:  Phys Rev Lett       Date:  2011-05-02       Impact factor: 9.161

2.  Modeling Viral Capsid Assembly.

Authors:  Michael F Hagan
Journal:  Adv Chem Phys       Date:  2014       Impact factor: 1.000

3.  Vibrational dynamics of icosahedrally symmetric biomolecular assemblies compared with predictions based on continuum elasticity.

Authors:  Zheng Yang; Ivet Bahar; Michael Widom
Journal:  Biophys J       Date:  2009-06-03       Impact factor: 4.033

4.  Swelling and softening of the cowpea chlorotic mottle virus in response to pH shifts.

Authors:  Bodo D Wilts; Iwan A T Schaap; Christoph F Schmidt
Journal:  Biophys J       Date:  2015-05-19       Impact factor: 4.033

5.  A crystallographic approach to structural transitions in icosahedral viruses.

Authors:  Giuliana Indelicato; Paolo Cermelli; David G Salthouse; Simone Racca; Giovanni Zanzotto; Reidun Twarock
Journal:  J Math Biol       Date:  2011-05-25       Impact factor: 2.259

6.  Recent Developments in Molecular Simulation Approaches to Study Spherical Virus Capsids.

Authors:  Eric R May
Journal:  Mol Simul       Date:  2014-04-01       Impact factor: 2.178

7.  Packaging contests between viral RNA molecules and kinetic selectivity.

Authors:  Inbal Mizrahi; Robijn Bruinsma; Joseph Rudnick
Journal:  PLoS Comput Biol       Date:  2022-04-01       Impact factor: 4.779

8.  Viral nanomechanics with a virtual atomic force microscope.

Authors:  María Aznar; Sergi Roca-Bonet; David Reguera
Journal:  J Phys Condens Matter       Date:  2018-05-17       Impact factor: 2.333

Review 9.  Physics of viral dynamics.

Authors:  Robijn F Bruinsma; Gijs J L Wuite; Wouter H Roos
Journal:  Nat Rev Phys       Date:  2021-01-12
  9 in total

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