Literature DB >> 18233335

Polymer translocation in crowded environments.

Ajay Gopinathan1, Yong Woon Kim.   

Abstract

We study the effect of the crowded environments on the translocation of a polymer through a pore in a membrane. By systematically treating the entropic penalty due to crowding, we show that the translocation dynamics are significantly altered, leading to novel scaling behaviors of the translocation time. We also observe new and qualitatively different translocation regimes depending upon the extent of crowding, transmembrane chemical potential asymmetry, and polymer length.

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Year:  2007        PMID: 18233335     DOI: 10.1103/PhysRevLett.99.228106

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  5 in total

1.  A single-molecule Hershey-Chase experiment.

Authors:  David Van Valen; David Wu; Yi-Ju Chen; Hannah Tuson; Paul Wiggins; Rob Phillips
Journal:  Curr Biol       Date:  2012-06-21       Impact factor: 10.834

2.  Conformation and dynamics of model polymer in connected chamber-pore system.

Authors:  Erica J Saltzman; Murugappan Muthukumar
Journal:  J Chem Phys       Date:  2009-12-07       Impact factor: 3.488

3.  Kinetics of DNA uptake during transformation provide evidence for a translocation ratchet mechanism.

Authors:  Christof Hepp; Berenike Maier
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

4.  Entropy-driven translocation of disordered proteins through the Gram-positive bacterial cell wall.

Authors:  David K Halladin; Fabian E Ortega; Katharine M Ng; Matthew J Footer; Nenad S Mitić; Saša N Malkov; Ajay Gopinathan; Kerwyn Casey Huang; Julie A Theriot
Journal:  Nat Microbiol       Date:  2021-07-29       Impact factor: 17.745

5.  Translocation of a Polymer through a Crowded Channel under Electrical Force.

Authors:  Tingting Sun; Yunxin Gen; Hujun Xie; Zhouting Jiang; Zhiyong Yang
Journal:  Biomed Res Int       Date:  2017-03-26       Impact factor: 3.411

  5 in total

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