Literature DB >> 18232717

Structural analyses of the ankyrin repeat domain of TRPV6 and related TRPV ion channels.

Christopher B Phelps1, Robert J Huang, Polina V Lishko, Ruiqi R Wang, Rachelle Gaudet.   

Abstract

Transient receptor potential (TRP) proteins are cation channels composed of a transmembrane domain flanked by large N- and C-terminal cytoplasmic domains. All members of the vanilloid family of TRP channels (TRPV) possess an N-terminal ankyrin repeat domain (ARD). The ARD of mammalian TRPV6, an important regulator of calcium uptake and homeostasis, is essential for channel assembly and regulation. The 1.7 A crystal structure of the TRPV6-ARD reveals conserved structural elements unique to the ARDs of TRPV proteins. First, a large twist between the fourth and fifth repeats is induced by residues conserved in all TRPV ARDs. Second, the third finger loop is the most variable region in sequence, length and conformation. In TRPV6, a number of putative regulatory phosphorylation sites map to the base of this third finger. Size exclusion chromatography and crystal packing indicate that the TRPV6-ARD does not assemble as a tetramer and is monomeric in solution. Adenosine triphosphate-agarose and calmodulin-agarose pull-down assays show that the TRPV6-ARD does not interact with either ligand, indicating a different functional role for the TRPV6-ARD than in the paralogous thermosensitive TRPV1 channel. Similar biochemical findings are also presented for the highly homologous mammalian TRPV5-ARD. The implications of the structural and biochemical data on the role of the ankyrin repeats in different TRPV channels are discussed.

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Year:  2008        PMID: 18232717      PMCID: PMC3006163          DOI: 10.1021/bi702109w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  47 in total

Review 1.  The TRP channels, a remarkably functional family.

Authors:  Craig Montell; Lutz Birnbaumer; Veit Flockerzi
Journal:  Cell       Date:  2002-03-08       Impact factor: 41.582

2.  Consensus-derived structural determinants of the ankyrin repeat motif.

Authors:  Leila K Mosavi; Daniel L Minor; Zheng-Yu Peng
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-02       Impact factor: 11.205

Review 3.  TRP channels as cellular sensors.

Authors:  David E Clapham
Journal:  Nature       Date:  2003-12-04       Impact factor: 49.962

Review 4.  The epithelial calcium channels, TRPV5 & TRPV6: from identification towards regulation.

Authors:  Els den Dekker; Joost G J Hoenderop; Bernd Nilius; René J M Bindels
Journal:  Cell Calcium       Date:  2003 May-Jun       Impact factor: 6.817

5.  wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models.

Authors:  A Perrakis; T K Sixma; K S Wilson; V S Lamzin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-07-01

6.  TRPV6 channel controls prostate cancer cell proliferation via Ca(2+)/NFAT-dependent pathways.

Authors:  V Lehen'kyi; M Flourakis; R Skryma; N Prevarskaya
Journal:  Oncogene       Date:  2007-05-28       Impact factor: 9.867

Review 7.  TRP channels: a TR(I)P through a world of multifunctional cation channels.

Authors:  Bernd Nilius; Thomas Voets
Journal:  Pflugers Arch       Date:  2005-07-13       Impact factor: 3.657

Review 8.  The venerable inveterate invertebrate TRP channels.

Authors:  Craig Montell
Journal:  Cell Calcium       Date:  2003 May-Jun       Impact factor: 6.817

9.  Regulation of the mouse epithelial Ca2(+) channel TRPV6 by the Ca(2+)-sensor calmodulin.

Authors:  Tim T Lambers; A Freek Weidema; Bernd Nilius; Joost G J Hoenderop; René J M Bindels
Journal:  J Biol Chem       Date:  2004-04-30       Impact factor: 5.157

10.  Expression of the Ca2+-selective cation channel TRPV6 in human prostate cancer: a novel prognostic marker for tumor progression.

Authors:  Thomas Fixemer; Ulrich Wissenbach; Veit Flockerzi; Helmut Bonkhoff
Journal:  Oncogene       Date:  2003-10-30       Impact factor: 9.867

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  46 in total

Review 1.  Structure of thermally activated TRP channels.

Authors:  Matthew R Cohen; Vera Y Moiseenkova-Bell
Journal:  Curr Top Membr       Date:  2014       Impact factor: 3.049

2.  A thermodynamic framework for understanding temperature sensing by transient receptor potential (TRP) channels.

Authors:  David E Clapham; Christopher Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-22       Impact factor: 11.205

Review 3.  Heteromerization of TRP channel subunits: extending functional diversity.

Authors:  Wei Cheng; Changsen Sun; Jie Zheng
Journal:  Protein Cell       Date:  2010-10-07       Impact factor: 14.870

Review 4.  TRP channels entering the structural era.

Authors:  Rachelle Gaudet
Journal:  J Physiol       Date:  2008-06-05       Impact factor: 5.182

5.  Intracellular ATP supports TRPV6 activity via lipid kinases and the generation of PtdIns(4,5) P₂.

Authors:  Eleonora Zakharian; Chike Cao; Tibor Rohacs
Journal:  FASEB J       Date:  2011-08-02       Impact factor: 5.191

Review 6.  A primer on ankyrin repeat function in TRP channels and beyond.

Authors:  Rachelle Gaudet
Journal:  Mol Biosyst       Date:  2008-03-26

7.  Differential regulation of TRPV1, TRPV3, and TRPV4 sensitivity through a conserved binding site on the ankyrin repeat domain.

Authors:  Christopher B Phelps; Ruiqi R Wang; Shelly S Choo; Rachelle Gaudet
Journal:  J Biol Chem       Date:  2009-10-28       Impact factor: 5.157

8.  Mutations in the gene encoding the calcium-permeable ion channel TRPV4 produce spondylometaphyseal dysplasia, Kozlowski type and metatropic dysplasia.

Authors:  Deborah Krakow; Joris Vriens; Natalia Camacho; Phi Luong; Hannah Deixler; Tara L Funari; Carlos A Bacino; Mira B Irons; Ingrid A Holm; Laurie Sadler; Ericka B Okenfuss; Annelies Janssens; Thomas Voets; David L Rimoin; Ralph S Lachman; Bernd Nilius; Daniel H Cohn
Journal:  Am J Hum Genet       Date:  2009-02-19       Impact factor: 11.025

9.  Toward elucidating the heat activation mechanism of the TRPV1 channel gating by molecular dynamics simulation.

Authors:  Han Wen; Feng Qin; Wenjun Zheng
Journal:  Proteins       Date:  2016-10-24

Review 10.  Active Ca(2+) reabsorption in the connecting tubule.

Authors:  Sandor Boros; René J M Bindels; Joost G J Hoenderop
Journal:  Pflugers Arch       Date:  2008-11-07       Impact factor: 3.657

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