Literature DB >> 18227132

Analysis of serial engagement and peptide-MHC transport in T cell receptor microclusters.

Omer Dushek1, Daniel Coombs.   

Abstract

In experiments where T cells interact with antigen-presenting-cells or supported bilayers bearing specific peptide-major-histocompatibility-complex (pMHC) molecules, T cell receptors (TCR) have been shown to form stable micrometer-scale clusters that travel from the periphery to the center of the contact region. pMHC molecules bind TCR on the opposing surface but the pMHC-TCR bond is weak and therefore pMHC can be expected to serially bind and unbind from TCR within the contact region. Using a novel mathematical analysis, we examine serial engagement of mobile clustered TCR by a single pMHC molecule. We determine the time a pMHC can be expected to remain within a TCR cluster. This also allows us to estimate the number of clustered TCR that are serially bound, and the distance a pMHC is transported by the clustered TCR. We find that TCR-pMHC binding alone does not allow substantial serial engagement of TCR and that the pMHC molecules are usually not transported to the center of the contact region by a single TCR cluster. We show that the presence of TCR coreceptors such as CD4 and CD8, or pMHC dimerization on the antigen-presenting cells, can substantially increase serial engagement and directed transport of pMHC. Finally, we analyze the effects of multiple TCR microclusters, showing that the size of individual clusters only weakly affects our prediction of TCR serial engagement by pMHC. Throughout, we draw parameter estimates from published data.

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Year:  2008        PMID: 18227132      PMCID: PMC2292378          DOI: 10.1529/biophysj.107.116897

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  51 in total

1.  The immunological synapse: a molecular machine controlling T cell activation.

Authors:  A Grakoui; S K Bromley; C Sumen; M M Davis; A S Shaw; P M Allen; M L Dustin
Journal:  Science       Date:  1999-07-09       Impact factor: 47.728

2.  The relationship of MHC-peptide binding and T cell activation probed using chemically defined MHC class II oligomers.

Authors:  J R Cochran; T O Cameron; L J Stern
Journal:  Immunity       Date:  2000-03       Impact factor: 31.745

3.  Triggering the TCR complex causes the downregulation of nonengaged receptors by a signal transduction-dependent mechanism.

Authors:  E San José; A Borroto; F Niedergang; A Alcover; B Alarcón
Journal:  Immunity       Date:  2000-02       Impact factor: 31.745

4.  Amino acid substitutions in the putative MHC class II "dimer of dimers" interface inhibit CD4+ T cell activation.

Authors:  R Lindstedt; N Monk; G Lombardi; R Lechler
Journal:  J Immunol       Date:  2001-01-15       Impact factor: 5.422

5.  A mathematical analysis of TCR serial triggering and down-regulation.

Authors:  J Sousa; J Carneiro
Journal:  Eur J Immunol       Date:  2000-11       Impact factor: 5.532

Review 6.  Making the T cell receptor go the distance: a topological view of T cell activation.

Authors:  A S Shaw; M L Dustin
Journal:  Immunity       Date:  1997-04       Impact factor: 31.745

7.  Calculations show substantial serial engagement of T cell receptors.

Authors:  C Wofsy; D Coombs; B Goldstein
Journal:  Biophys J       Date:  2001-02       Impact factor: 4.033

8.  T Cell Receptor Binding to a pMHCII Ligand Is Kinetically Distinct from and Independent of CD4.

Authors:  Y Xiong; P Kern; H Chang; E Reinherz
Journal:  J Biol Chem       Date:  2000-12-05       Impact factor: 5.157

9.  Crystal structure of the complex between human CD8alpha(alpha) and HLA-A2.

Authors:  G F Gao; J Tormo; U C Gerth; J R Wyer; A J McMichael; D I Stuart; J I Bell; E Y Jones; B K Jakobsen
Journal:  Nature       Date:  1997-06-05       Impact factor: 49.962

10.  The p56lck SH2 domain mediates recruitment of CD8/p56lck to the activated T cell receptor/CD3/zeta complex.

Authors:  M Thome; V Germain; J P DiSanto; O Acuto
Journal:  Eur J Immunol       Date:  1996-09       Impact factor: 5.532

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  11 in total

1.  Fast on-rates allow short dwell time ligands to activate T cells.

Authors:  Christopher C Govern; Michelle K Paczosa; Arup K Chakraborty; Eric S Huseby
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-26       Impact factor: 11.205

2.  Modulation of T cell activation by localized K⁺ accumulation at the immunological synapse--a mathematical model.

Authors:  Geoffrey V Martin; Yeoheung Yun; Laura Conforti
Journal:  J Theor Biol       Date:  2012-01-23       Impact factor: 2.691

Review 3.  Pairing computation with experimentation: a powerful coupling for understanding T cell signalling.

Authors:  Arup K Chakraborty; Jayajit Das
Journal:  Nat Rev Immunol       Date:  2010-01       Impact factor: 53.106

Review 4.  Signaling microdomains in T cells.

Authors:  Kaushik Choudhuri; Michael L Dustin
Journal:  FEBS Lett       Date:  2010-10-19       Impact factor: 4.124

5.  Dependence of T cell antigen recognition on T cell receptor-peptide MHC confinement time.

Authors:  Milos Aleksic; Omer Dushek; Hao Zhang; Eugene Shenderov; Ji-Li Chen; Vincenzo Cerundolo; Daniel Coombs; P Anton van der Merwe
Journal:  Immunity       Date:  2010-02-04       Impact factor: 31.745

Review 6.  Phenotypic models of T cell activation.

Authors:  Melissa Lever; Philip K Maini; P Anton van der Merwe; Omer Dushek
Journal:  Nat Rev Immunol       Date:  2014-09       Impact factor: 53.106

7.  Protein clusters on the T cell surface may suppress spurious early signaling events.

Authors:  Woo Chung; Steven M Abel; Arup K Chakraborty
Journal:  PLoS One       Date:  2012-09-04       Impact factor: 3.240

8.  A role for rebinding in rapid and reliable T cell responses to antigen.

Authors:  Omer Dushek; Raibatak Das; Daniel Coombs
Journal:  PLoS Comput Biol       Date:  2009-11-26       Impact factor: 4.475

9.  A stochastic T cell response criterion.

Authors:  James Currie; Mario Castro; Grant Lythe; Ed Palmer; Carmen Molina-París
Journal:  J R Soc Interface       Date:  2012-06-28       Impact factor: 4.118

Review 10.  Experimental and theoretical bases for mechanisms of antigen discrimination by T cells.

Authors:  Masashi K Kajita; Ryo Yokota; Kazuyuki Aihara; Tetsuya J Kobayashi
Journal:  Biophysics (Nagoya-shi)       Date:  2015-03-26
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