Literature DB >> 18221009

Molecular modeling of two CYP2C19 SNPs and its implications for personalized drug design.

Jing-Fang Wang1, Dong-Qing Wei, Chao Chen, Yixue Li, Kuo-Chen Chou.   

Abstract

CYP2C19 is an important member of the cytochrome P-450 enzyme superfamily and plays a significant role in the drug metabolism. In order to gain insights for developing personalized drugs, the structure-activity relationships of two SNPs, W120R and I331V, with the ligands of CEC, Fluvoxamine, Lescol and Ticlopidine were investigated through the structure-activity relationship approach. By means of a series of docking studies, the binding pockets of the two SNPs for the four compounds are explicitly defined that will be very useful for conducting mutagenesis studies, providing insights into personalization of drug treatments and stimulating novel strategies for finding desired personalized drugs.

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Year:  2008        PMID: 18221009     DOI: 10.2174/092986608783330305

Source DB:  PubMed          Journal:  Protein Pept Lett        ISSN: 0929-8665            Impact factor:   1.890


  15 in total

1.  Analysis of the CYP2C19 genetic polymorphism in Han and Uyghur patients with cardiovascular and cerebrovascular diseases in the Kashi area of Xinjiang.

Authors:  Yadong Li; Heyin Yang; Xiaoguang Zou; Lijun Xiong; Zhen Li; Jianzhang Luo; Bo Zhao; Wen Liu; Xili Du
Journal:  Med Sci Monit       Date:  2014-11-09

2.  Exploration of conformational transition in the aryl-binding site of human FXa using molecular dynamics simulations.

Authors:  Jing-Fang Wang; Pei Hao; Yi-Xue Li; Jian-Liang Dai; Xuan Li
Journal:  J Mol Model       Date:  2011-11-25       Impact factor: 1.810

3.  Predicting drug-target interaction networks based on functional groups and biological features.

Authors:  Zhisong He; Jian Zhang; Xiao-He Shi; Le-Le Hu; Xiangyin Kong; Yu-Dong Cai; Kuo-Chen Chou
Journal:  PLoS One       Date:  2010-03-11       Impact factor: 3.240

4.  Computational design of glutamate dehydrogenase in Bacillus subtilis natto.

Authors:  Li-Li Chen; Jia-Le Wang; Yu Hu; Bing-Jun Qian; Xiao-Min Yao; Jing-Fang Wang; Jian-Hua Zhang
Journal:  J Mol Model       Date:  2013-01-22       Impact factor: 1.810

5.  Comparative docking study of anibamine as the first natural product CCR5 antagonist in CCR5 homology models.

Authors:  Guo Li; Kendra M Haney; Glen E Kellogg; Yan Zhang
Journal:  J Chem Inf Model       Date:  2009-01       Impact factor: 4.956

6.  An allosteric mechanism inferred from molecular dynamics simulations on phospholamban pentamer in lipid membranes.

Authors:  Peng Lian; Dong-Qing Wei; Jing-Fang Wang; Kuo-Chen Chou
Journal:  PLoS One       Date:  2011-04-15       Impact factor: 3.240

7.  Insights from modeling the 3D structure of New Delhi metallo-β-lactamse and its binding interactions with antibiotic drugs.

Authors:  Jing-Fang Wang; Kuo-Chen Chou
Journal:  PLoS One       Date:  2011-04-11       Impact factor: 3.240

8.  Insights into the mutation-induced HHH syndrome from modeling human mitochondrial ornithine transporter-1.

Authors:  Jing-Fang Wang; Kuo-Chen Chou
Journal:  PLoS One       Date:  2012-01-26       Impact factor: 3.240

9.  Protein domain boundary predictions: a structural biology perspective.

Authors:  Svetlana Kirillova; Suresh Kumar; Oliviero Carugo
Journal:  Open Biochem J       Date:  2009-01-21

10.  Scaffold-based pan-agonist design for the PPARα, PPARβ and PPARγ receptors.

Authors:  Li-Song Zhang; Shu-Qing Wang; Wei-Ren Xu; Run-Ling Wang; Jing-Fang Wang
Journal:  PLoS One       Date:  2012-10-31       Impact factor: 3.240

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