Literature DB >> 18211280

Analysing hierarchy in the organization of biological and physical systems.

Gerard A J M Jagers op Akkerhuis1.   

Abstract

A structured approach is discussed for analysing hierarchy in the organization of biological and physical systems. The need for a structured approach follows from the observation that many hierarchies in the literature apply conflicting hierarchy rules and include ill-defined systems. As an alternative, we suggest a framework that is based on the following analytical steps: determination of the succession stage of the universe, identification of a specific system as part of the universe, specification of external influences on a system's creation and analysis of a system's internal organization. At the end, the paper discusses practical implications of the proposed method for the analysis of system organization and hierarchy in biology, ecology and physics.

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Year:  2008        PMID: 18211280     DOI: 10.1111/j.1469-185X.2007.00023.x

Source DB:  PubMed          Journal:  Biol Rev Camb Philos Soc        ISSN: 0006-3231


  4 in total

1.  Top-level categories of constitutively organized material entities--suggestions for a formal top-level ontology.

Authors:  Lars Vogt; Peter Grobe; Björn Quast; Thomas Bartolomaeus
Journal:  PLoS One       Date:  2011-04-21       Impact factor: 3.240

2.  Spatio-structural granularity of biological material entities.

Authors:  Lars Vogt
Journal:  BMC Bioinformatics       Date:  2010-05-28       Impact factor: 3.169

3.  Accommodating ontologies to biological reality--top-level categories of cumulative-constitutively organized material entities.

Authors:  Lars Vogt; Peter Grobe; Björn Quast; Thomas Bartolomaeus
Journal:  PLoS One       Date:  2012-01-09       Impact factor: 3.240

4.  Levels and building blocks-toward a domain granularity framework for the life sciences.

Authors:  Lars Vogt
Journal:  J Biomed Semantics       Date:  2019-01-28
  4 in total

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