Literature DB >> 18199047

Non-coding RNAs regulating the transcriptional machinery.

Charlotte Barrandon1, Béatrice Spiluttini, Olivier Bensaude.   

Abstract

During the past decade, numerous ncRNAs (non-coding RNAs) have been identified as regulators of transcription. This review focuses on a few examples of ncRNAs that directly interact with and regulate components of the transcription machinery. Artificial RNA aptamers have been selected against components of the transcriptional machinery. The bacterial 6S RNA and the eukaryotic B2 RNA directly target RNA polymerases. The 7SK RNA, U1 snRNA (small nuclear RNA) and SRA (steroid receptor RNA activator) RNA bind to and regulate the activity of transcription factors. Xist (X-inactive-specific transcript) and roX (RNA on the X) RNAs are involved in epigenetic regulation of transcription through the recruitment of histone-modifying enzymes.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18199047     DOI: 10.1042/BC20070090

Source DB:  PubMed          Journal:  Biol Cell        ISSN: 0248-4900            Impact factor:   4.458


  41 in total

1.  Smicl is required for phosphorylation of RNA polymerase II and affects 3'-end processing of RNA at the midblastula transition in Xenopus.

Authors:  Clara Collart; Joana M Ramis; Thomas A Down; James C Smith
Journal:  Development       Date:  2009-10       Impact factor: 6.868

2.  Inhibiting eukaryotic transcription: Which compound to choose? How to evaluate its activity?

Authors:  Olivier Bensaude
Journal:  Transcription       Date:  2011-05

3.  A systems view of the protein expression process.

Authors:  Sucheta Gokhale; Dimpal Nyayanit; Chetan Gadgil
Journal:  Syst Synth Biol       Date:  2011-10-19

4.  A novel function of RNAs arising from the long terminal repeat of human endogenous retrovirus 9 in cell cycle arrest.

Authors:  Lai Xu; Abdel G Elkahloun; Fabio Candotti; Andrzej Grajkowski; Serge L Beaucage; Emanuel F Petricoin; Valerie Calvert; Hartmut Juhl; Frederick Mills; Karen Mason; Neal Shastri; Josh Chik; Cynthia Xu; Amy S Rosenberg
Journal:  J Virol       Date:  2012-10-24       Impact factor: 5.103

5.  A novel antisense RNA regulates at transcriptional level the virulence gene icsA of Shigella flexneri.

Authors:  Mara Giangrossi; Gianni Prosseda; Chi Nhan Tran; Anna Brandi; Bianca Colonna; Maurizio Falconi
Journal:  Nucleic Acids Res       Date:  2010-02-03       Impact factor: 16.971

6.  Nuclear organization and dynamics of 7SK RNA in regulating gene expression.

Authors:  Kannanganattu V Prasanth; Matthew Camiolo; Grace Chan; Vidisha Tripathi; Laurence Denis; Tetsuya Nakamura; Michael R Hübner; David L Spector
Journal:  Mol Biol Cell       Date:  2010-09-29       Impact factor: 4.138

7.  Experimental identification and characterization of 97 novel npcRNA candidates in Salmonella enterica serovar Typhi.

Authors:  Suresh V Chinni; Carsten A Raabe; Robaiza Zakaria; Gerrit Randau; Chee Hock Hoe; Anja Zemann; Juergen Brosius; Thean-Hock Tang; Timofey S Rozhdestvensky
Journal:  Nucleic Acids Res       Date:  2010-05-11       Impact factor: 16.971

8.  Homology-based annotation of non-coding RNAs in the genomes of Schistosoma mansoni and Schistosoma japonicum.

Authors:  Claudia S Copeland; Manja Marz; Dominic Rose; Jana Hertel; Paul J Brindley; Clara Bermudez Santana; Stephanie Kehr; Camille Stephan-Otto Attolini; Peter F Stadler
Journal:  BMC Genomics       Date:  2009-10-08       Impact factor: 3.969

9.  An intergenic non-coding rRNA correlated with expression of the rRNA and frequency of an rRNA single nucleotide polymorphism in lung cancer cells.

Authors:  Yih-Horng Shiao; Sorin T Lupascu; Yuhan D Gu; Wojciech Kasprzak; Christopher J Hwang; Janet R Fields; Robert M Leighty; Octavio Quiñones; Bruce A Shapiro; W Gregory Alvord; Lucy M Anderson
Journal:  PLoS One       Date:  2009-10-19       Impact factor: 3.240

10.  Non-coding murine centromeric transcripts associate with and potentiate Aurora B kinase.

Authors:  Federica Ferri; Haniaa Bouzinba-Segard; Guillaume Velasco; Florent Hubé; Claire Francastel
Journal:  Nucleic Acids Res       Date:  2009-06-19       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.