Literature DB >> 18196533

Temperature and pH effects on biophysical and morphological properties of self-assembling peptide RADA16-I.

Zhaoyang Ye1, Hangyu Zhang, Hanlin Luo, Shunkang Wang, Qinghan Zhou, Xinpeng DU, Chengkang Tang, Liyan Chen, Jingping Liu, Ying-Kang Shi, Er-Yong Zhang, Rutledge Ellis-Behnke, Xiaojun Zhao.   

Abstract

It has been found that the self-assembling peptide RADA 16-I forms a beta-sheet structure and self-assembles into nanofibers and scaffolds in favor of cell growth, hemostasis and tissue-injury repair. But its biophysical and morphological properties, especially for its beta-sheet and self-assembling properties in heat- and pH-denatured conditions, remain largely unclear. In order to better understand and design nanobiomaterials, we studied the self-assembly behaviors of RADA16-I using CD and atomic force microscopy (AFM) measurements in various pH and heat-denatured conditions. Here, we report that the peptide, when exposed to pH 1.0 and 4.0, was still able to assume a typical beta-sheet structure and self-assemble into long nanofiber, although its beta-sheet content was dramatically decreased by 10% in a pH 1.0 solution. However, the peptide, when exposed to pH 13.0, drastically lost its beta-sheet structure and assembled into different small-sized globular aggregates. Similarly, the peptide, when heat-denatured from 25 to 70 degrees C, was still able to assume a typical beta-sheet structure with 46% content, but self-assembled into small-sized globular aggregates at much higher temperature. Titration experiments showed that the peptide RADA16-I exists in three types of ionic species: acidic (fully protonated peptide), zwitterionic (electrically neutral peptide carrying partial positive and negative charges) and basic (fully deprotonated peptide) species, called 'super ions'. The unordered structure and beta-turn of these 'super ions' via hydrogen or ionic bonds, and heat Brownian motion under the above denatured conditions would directly affect the stability of the beta-sheet and nanofibers. These results help us in the design of future nanobiomaterials, such as biosensors, based on beta-sheets and environmental changes. These results also help understand the pathogenesis of the beta-sheet-mediated neuronal diseases such as Alzheimer's disease and the mechanism of hemostasis.

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Year:  2008        PMID: 18196533     DOI: 10.1002/psc.988

Source DB:  PubMed          Journal:  J Pept Sci        ISSN: 1075-2617            Impact factor:   1.905


  22 in total

1.  End-to-end self-assembly of RADA 16-I nanofibrils in aqueous solutions.

Authors:  Paolo Arosio; Marta Owczarz; Hua Wu; Alessandro Butté; Massimo Morbidelli
Journal:  Biophys J       Date:  2012-04-03       Impact factor: 4.033

2.  Chondrogenic effect of cell-based scaffold of self-assembling peptides/PLGA-PLL loading the hTGFβ3 plasmid DNA.

Authors:  Qiyong Pan; Wenkai Li; Xuefeng Yuan; Yeltay Rakhmanov; Pengcheng Wang; Rui Lu; Zekai Mao; Xiaobin Shang; Hongbo You
Journal:  J Mater Sci Mater Med       Date:  2015-12-16       Impact factor: 3.896

Review 3.  Supramolecular Hydrogelators and Hydrogels: From Soft Matter to Molecular Biomaterials.

Authors:  Xuewen Du; Jie Zhou; Junfeng Shi; Bing Xu
Journal:  Chem Rev       Date:  2015-12-08       Impact factor: 60.622

4.  Machine Learning in a Molecular Modeling Course for Chemistry, Biochemistry, and Biophysics Students.

Authors:  Jacob M Remington; Jonathon B Ferrell; Marlo Zorman; Adam Petrucci; Severin T Schneebeli; Jianing Li
Journal:  Biophysicist (Rockv)       Date:  2020-08-13

5.  Rational design of charged peptides that self-assemble into robust nanofibers as immune-functional scaffolds.

Authors:  Hangyu Zhang; Jaehyung Park; Yonghou Jiang; Kim A Woodrow
Journal:  Acta Biomater       Date:  2017-03-30       Impact factor: 8.947

6.  In vitro study of α-synuclein protofibrils by cryo-EM suggests a Cu(2+)-dependent aggregation pathway.

Authors:  Hangyu Zhang; Amy Griggs; Jean-Christophe Rochet; Lia A Stanciu
Journal:  Biophys J       Date:  2013-06-18       Impact factor: 4.033

7.  Glycine-spacers influence functional motifs exposure and self-assembling propensity of functionalized substrates tailored for neural stem cell cultures.

Authors:  Francesca Taraballi; Antonino Natalello; Marcello Campione; Omar Villa; Silvia M Doglia; Alberto Paleari; Fabrizio Gelain
Journal:  Front Neuroeng       Date:  2010-02-08

Review 8.  Biomaterials and Advanced Technologies for Hemostatic Management of Bleeding.

Authors:  DaShawn A Hickman; Christa L Pawlowski; Ujjal D S Sekhon; Joyann Marks; Anirban Sen Gupta
Journal:  Adv Mater       Date:  2017-11-22       Impact factor: 30.849

9.  Molecular structure of RADA16-I designer self-assembling peptide nanofibers.

Authors:  Ashley R Cormier; Xiaodong Pang; Maxwell I Zimmerman; Huan-Xiang Zhou; Anant K Paravastu
Journal:  ACS Nano       Date:  2013-09-05       Impact factor: 15.881

10.  Molecular mechanisms of RADA16-1 peptide on fast stop bleeding in rat models.

Authors:  Ting Wang; Xiaozhong Zhong; Songtao Wang; Fei Lv; Xiaojun Zhao
Journal:  Int J Mol Sci       Date:  2012-11-19       Impact factor: 5.923

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