Literature DB >> 18193280

Assessing a signal model and identifying brain activity from fMRI data by a detrending-based fractal analysis.

Jing Hu1, Jae-Min Lee, Jianbo Gao, Keith D White, Bruce Crosson.   

Abstract

One of the major challenges of functional magnetic resonance imaging (fMRI) data analysis is to develop simple and reliable methods to correlate brain regions with functionality. In this paper, we employ a detrending-based fractal method, called detrended fluctuation analysis (DFA), to identify brain activity from fMRI data. We perform three tasks: (a) Estimating noise level from experimental fMRI data; (b) Assessing a signal model recently introduced by Birn et al.; and (c) Evaluating the effectiveness of DFA for discriminating brain activations from artifacts. By computing the receiver operating characteristic (ROC) curves, we find that the ROC curve for experimental data is similar to the curve for simulated data with similar signal-to-noise ratio (SNR). This suggests that the proposed algorithm for estimating noise level is very effective and that Birn's model fits our experimental data very well. The brain activation maps for experimental data derived by DFA are similar to maps derived by deconvolution using a widely used software, AFNI. Considering that deconvolution explicitly uses the information about the experimental paradigm to extract the activation patterns whereas DFA does not, it remains to be seen whether one can effectively integrate the two methods to improve accuracy for detecting brain areas related to functional activity.

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Year:  2008        PMID: 18193280      PMCID: PMC3010870          DOI: 10.1007/s00429-007-0166-9

Source DB:  PubMed          Journal:  Brain Struct Funct        ISSN: 1863-2653            Impact factor:   3.270


  21 in total

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Authors:  M Desco; J A Hernandez; A Santos; M Brammer
Journal:  Hum Brain Mapp       Date:  2001-09       Impact factor: 5.038

2.  On multivariate spectral analysis of fMRI time series.

Authors:  K Müller; G Lohmann; V Bosch; D Y von Cramon
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3.  Measuring interregional functional connectivity using coherence and partial coherence analyses of fMRI data.

Authors:  Felice T Sun; Lee M Miller; Mark D'Esposito
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4.  Colored noise and computational inference in neurophysiological (fMRI) time series analysis: resampling methods in time and wavelet domains.

Authors:  E Bullmore; C Long; J Suckling; J Fadili; G Calvert; F Zelaya; T A Carpenter; M Brammer
Journal:  Hum Brain Mapp       Date:  2001-02       Impact factor: 5.038

5.  Experimental designs and processing strategies for fMRI studies involving overt verbal responses.

Authors:  Rasmus M Birn; Robert W Cox; Peter A Bandettini
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

6.  Assessment of long-range correlation in time series: how to avoid pitfalls.

Authors:  Jianbo Gao; Jing Hu; Wen-Wen Tung; Yinhe Cao; N Sarshar; Vwani P Roychowdhury
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-01-13

7.  Event-related fMRI of tasks involving brief motion.

Authors:  R M Birn; P A Bandettini; R W Cox; R Shaker
Journal:  Hum Brain Mapp       Date:  1999       Impact factor: 5.038

8.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

9.  Empirical analyses of BOLD fMRI statistics. I. Spatially unsmoothed data collected under null-hypothesis conditions.

Authors:  E Zarahn; G K Aguirre; M D'Esposito
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10.  Parametric analysis of fMRI data using linear systems methods.

Authors:  M S Cohen
Journal:  Neuroimage       Date:  1997-08       Impact factor: 6.556

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  6 in total

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Journal:  Sci Rep       Date:  2017-11-02       Impact factor: 4.379

Review 3.  Monofractal analysis of functional magnetic resonance imaging: An introductory review.

Authors:  Olivia Lauren Campbell; Alexander Mark Weber
Journal:  Hum Brain Mapp       Date:  2022-03-09       Impact factor: 5.038

4.  Approaches to brain stress testing: BOLD magnetic resonance imaging with computer-controlled delivery of carbon dioxide.

Authors:  W Alan C Mutch; Daniel M Mandell; Joseph A Fisher; David J Mikulis; Adrian P Crawley; Olivia Pucci; James Duffin
Journal:  PLoS One       Date:  2012-11-05       Impact factor: 3.240

5.  Pitfalls in Fractal Time Series Analysis: fMRI BOLD as an Exemplary Case.

Authors:  Andras Eke; Peter Herman; Basavaraju G Sanganahalli; Fahmeed Hyder; Peter Mukli; Zoltan Nagy
Journal:  Front Physiol       Date:  2012-11-15       Impact factor: 4.566

6.  Long-Range Temporal Correlations, Multifractality, and the Causal Relation between Neural Inputs and Movements.

Authors:  Jing Hu; Yi Zheng; Jianbo Gao
Journal:  Front Neurol       Date:  2013-10-09       Impact factor: 4.003

  6 in total

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