Literature DB >> 18193063

Superwobbling facilitates translation with reduced tRNA sets.

Marcelo Rogalski1, Daniel Karcher, Ralph Bock.   

Abstract

Some bacterial and most organelle genomes do not encode the full set of 32 tRNA species required to read all codons according to Crick's wobble rules. 'Superwobble', in which a tRNA species with an unmodified U in the wobble position reads all four nucleotides in the third codon position, represents one possible mechanism for how a reduced tRNA set could still suffice. We have tested the superwobble hypothesis by producing knockout mutants for the pair of plastid glycine tRNA genes. Here we show that, whereas the tRNA gene with U in the wobble position is essential, the gene with G in this position is nonessential, demonstrating that the U-containing anticodon can indeed read all four glycine triplets. We also show that the price for superwobbling is a reduced translational efficiency, which explains why most organisms prefer pairs of isoaccepting tRNAs over the superwobbling mechanism.

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Year:  2008        PMID: 18193063     DOI: 10.1038/nsmb.1370

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  74 in total

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2.  Unassigned codons, nonsense suppression, and anticodon modifications in the evolution of the genetic code.

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3.  Chloramphenicol acetyltransferase as selectable marker for plastid transformation.

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4.  Inducible gene expression from the plastid genome by a synthetic riboswitch.

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5.  Plastid Transformation in Tomato: A Vegetable Crop and Model Species.

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Journal:  Plant Physiol       Date:  2018-11-08       Impact factor: 8.340

7.  An organellar maturase associates with multiple group II introns.

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Review 8.  A critical analysis of codon optimization in human therapeutics.

Authors:  Vincent P Mauro; Stephen A Chappell
Journal:  Trends Mol Med       Date:  2014-09-25       Impact factor: 11.951

9.  Arabidopsis tRNA adenosine deaminase arginine edits the wobble nucleotide of chloroplast tRNAArg(ACG) and is essential for efficient chloroplast translation.

Authors:  Etienne Delannoy; Monique Le Ret; Emmanuelle Faivre-Nitschke; Gonzalo M Estavillo; Marc Bergdoll; Nicolas L Taylor; Barry J Pogson; Ian Small; Patrice Imbault; José M Gualberto
Journal:  Plant Cell       Date:  2009-07-14       Impact factor: 11.277

10.  Extensive homologous recombination between introduced and native regulatory plastid DNA elements in transplastomic plants.

Authors:  Benjamin N Gray; Beth A Ahner; Maureen R Hanson
Journal:  Transgenic Res       Date:  2009-01-28       Impact factor: 2.788

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