Literature DB >> 18186635

Multiple probes are required to explore and control the rugged energy landscape of RNA hairpins.

Changbong Hyeon1, D Thirumalai.   

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Year:  2008        PMID: 18186635     DOI: 10.1021/ja0771641

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


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  25 in total

1.  A kinetic zipper model with intrachain interactions applied to nucleic acid hairpin folding kinetics.

Authors:  Serguei V Kuznetsov; Anjum Ansari
Journal:  Biophys J       Date:  2012-01-03       Impact factor: 4.033

Review 2.  Capturing the essence of folding and functions of biomolecules using coarse-grained models.

Authors:  Changbong Hyeon; D Thirumalai
Journal:  Nat Commun       Date:  2011-09-27       Impact factor: 14.919

3.  On artifacts in single-molecule force spectroscopy.

Authors:  Pilar Cossio; Gerhard Hummer; Attila Szabo
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-04       Impact factor: 11.205

4.  Understanding the kinetic mechanism of RNA single base pair formation.

Authors:  Xiaojun Xu; Tao Yu; Shi-Jie Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-22       Impact factor: 11.205

5.  A new computational approach for mechanical folding kinetics of RNA hairpins.

Authors:  Song Cao; Shi-Jie Chen
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

6.  DNA energy landscapes via calorimetric detection of microstate ensembles of metastable macrostates and triplet repeat diseases.

Authors:  Jens Völker; Horst H Klump; Kenneth J Breslauer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-17       Impact factor: 11.205

7.  Assembly mechanisms of RNA pseudoknots are determined by the stabilities of constituent secondary structures.

Authors:  Samuel S Cho; David L Pincus; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-05       Impact factor: 11.205

8.  Refolding dynamics of stretched biopolymers upon force quench.

Authors:  Changbong Hyeon; Greg Morrison; David L Pincus; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-13       Impact factor: 11.205

9.  Extracting intrinsic dynamic parameters of biomolecular folding from single-molecule force spectroscopy experiments.

Authors:  Gi-Moon Nam; Dmitrii E Makarov
Journal:  Protein Sci       Date:  2015-07-14       Impact factor: 6.725

10.  Conformational heterogeneity of the SAM-I riboswitch transcriptional ON state: a chaperone-like role for S-adenosyl methionine.

Authors:  Wei Huang; Joohyun Kim; Shantenu Jha; Fareed Aboul-Ela
Journal:  J Mol Biol       Date:  2012-03-13       Impact factor: 5.469

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