Literature DB >> 18183460

Fungal communities in decaying sapwood and heartwood of a conifer Keteleeria evelyniana.

Han-Bo Zhang1, Ming-Xia Yang, Ran Tu, Lei Gao, Zhi-Wei Zhao.   

Abstract

Fungal communities in decaying sapwood and heartwood of K. evelyniana were demonstrated through construction of four 18 S rRNA gene libraries. The 210 sequenced clones were clustered into 11 subgroups, belonging to Basidiomycota (71.9%) and to Ascomycota (22.4%) and unclassified (1 subgroup; 5.7%). The heartwood displayed higher species richness than the sapwood. Basidiomycota were dominant in either the heartwood or the sapwood. Phylogenetically diverse Homobasidiomycetes were detected in the heartwood, contrary to the sapwood, where Heterobasidiomycetes were detected. Clones close to Spongipellis unicolor dominated in the heartwood (21 of 99 clones), while those close to Hydnochaete olivacea dominated in the sapwood (41 of 111 clones). The common species between the two parts were those related to S. unicolor, Calocera cornea, Debaryomyces hansenii, Davidiella tassiana, and Nomuraea rileyi and those from Chaetothyriomycetes.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18183460     DOI: 10.1007/s00284-007-9092-6

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  7 in total

1.  PCR primers that amplify fungal rRNA genes from environmental samples.

Authors:  J Borneman; R J Hartin
Journal:  Appl Environ Microbiol       Date:  2000-10       Impact factor: 4.792

2.  Analysis of character correlations among wood decay mechanisms, mating systems, and substrate ranges in homobasidiomycetes.

Authors:  D S Hibbett; M J Donoghue
Journal:  Syst Biol       Date:  2001-04       Impact factor: 15.683

3.  Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil.

Authors:  Ian C Anderson; Colin D Campbell; James I Prosser
Journal:  Environ Microbiol       Date:  2003-01       Impact factor: 5.491

Review 4.  Diversity and ecology of soil fungal communities: increased understanding through the application of molecular techniques.

Authors:  Ian C Anderson; John W G Cairney
Journal:  Environ Microbiol       Date:  2004-08       Impact factor: 5.491

5.  Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness.

Authors:  Patrick D Schloss; Jo Handelsman
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

6.  Detection and identification of decay fungi in spruce wood by restriction fragment length polymorphism analysis of amplified genes encoding rRNA.

Authors:  C A Jasalavich; A Ostrofsky; J Jellison
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

7.  Bacterial diversity in agricultural soils during litter decomposition.

Authors:  Oliver Dilly; Jaap Bloem; An Vos; Jean Charles Munch
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

  7 in total
  1 in total

1.  Combining high-throughput sequencing with fruit body surveys reveals contrasting life-history strategies in fungi.

Authors:  Otso Ovaskainen; Dmitry Schigel; Heini Ali-Kovero; Petri Auvinen; Lars Paulin; Björn Nordén; Jenni Nordén
Journal:  ISME J       Date:  2013-04-11       Impact factor: 10.302

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.