| Literature DB >> 18182111 |
Joanna Vermeij1, Erik Teugels, Claire Bourgain, Ji Xiangming, Peter in 't Veld, Vanessa Ghislain, Bart Neyns, Jacques De Grève.
Abstract
BACKGROUND: The status of the EGFR and HER2-neu genes has not been fully defined in ovarian cancer. An integrated analysis of both genes could help define the proportion of patients that would potentially benefit from targeted therapies.Entities:
Mesh:
Substances:
Year: 2008 PMID: 18182111 PMCID: PMC2266762 DOI: 10.1186/1471-2407-8-3
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
EGFR primers
| First step (5'—3') | Second step (5'—3') | Product Size(BP) | |
| Exon18 | F: agcatggtgagggctgag | F: *gctgaggtgacccttgtctc | 258 |
| R: acagcttgcaaggactctgg | R: acagcttgcaaggactctgg | ||
| Exon19 | F: catgtggcaccatctcaca | F: catgtggcaccatctcaca | 179 |
| R: ccacacagcaaagcagaaac | R: *ggtgtgtcgtttcgtctttg | ||
| Exon20 | F: cgaagccacactgacgtg | F: cgaagccacactgacgtg | 244 |
| R: ctatcccaggagcgcagac | R: *ccgtatctcccttccctgat | ||
| Exon21 | F: cctcacagcagggtcttctc | F: cctcacagcagggtcttctc | 215 |
| R: aatgctggctgacctaaagc | R: *ccgactggatttcg | ||
| Exon22 | F: tttttccaacagagggaaact | F: *cactgcctcatctctcacca | 237 |
| R:aaagaaaatacttgcatgtcagagg | R:aaagaaaatacttgcatgtcagagg | ||
| Exon23 | F: ccactgccttcttttcttgc | F: *tttcttgcttcatcctctcag | 205 |
| R: cagctaggcagtgtggacag | R: cagctaggcagtgtggacag | ||
| Exon24 | F: gcatcaccaatgccttcttt | F: *gcaatgccatctttatcatttc | 200 |
| R: actcttcccaatggaagcac | R: actcttcccaatggaagcac |
EGFR primers used for amplification (hemi-nested PCRs).
* indicates that a GC clamp was added at the 5' end of the primer,
GC clamp: cgcccgccgcgccccgcgcccggcccgccgcccccgcccg
HER2-neu primers
| First step(5'—3') | Second step(5'—3') | Product Size(BP) | |
| Exon18 | F: ccagcactgacccaccac | F: ccagcactgacccaccac | 228 |
| R: ctcttgcccctcccatca | R: *agaactgccgaccacacc | ||
| Exon19 | F: cccacgctcttctcactcat | F: cccacgctcttctcactcat | 183 |
| R: agagaccagagcccagacct | R: *gggtccttcctgtcctccta | ||
| Exon20 | F: tgtggtctcccataccctct | F: *ctctcagcgtacccttgtcc | 230 |
| R: caaagagcccaggtgcatac | R: caaagagcccaggtgcatac | ||
| Exon21 | F: tacatgggtgcttcccattc | F: tacatgggtgcttcccattc | 201 |
| R:catgggctagacaccactcc | R: *gctccttggtccttcaccta | ||
| Exon22 | F: tagcccatgggagaactctg | F: *ctccccacaacacacagttg | 186 |
| R: agctctcatcctccctccag | R: agctctcatcctccctccag | ||
| Exon23 | F: actcctgaccctgtctctgc | F: actcctgaccctgtctctgc | 220 |
| R: ctttcatgccccttgtgg | R: *aggacctcccaccctcct | ||
| Exon24 | F: accagactggagggggagt | F: *agaggcagcaagcacacag | 203 |
| R: gagggtgctcttagccacag | R: gagggtgctcttagccacag |
HER2-neu primers used for amplification (hemi-nested PCRs)
* indicates that a GC clamp was added at the 5' end of the primer,
GC clamp: cgcccgccgcgccccgcgcccggcccgccgcccccgcccg
EGFR and HER2-neu status of ovarian tumours
| EGFR (ErbB-1) | HER2-neu (ErbB-2) | |||||||||||
| Histopathological subtype (N = 52) | IHC (N = 31) | FISH (N = 27) | TKD Mutation (N = 68) | IHC (N = 31) | FISH (N = 6) amplification | TKD Mutation (N = 68) | ||||||
| 0 | 1+ | 2/3+ | < 2 | P | 0 | 1+ | 2/3+ | |||||
| Adenocarcinoma: | ||||||||||||
| Serous | 27 | 7 | 4 | 8 | 17 | 3 | 34 | 11 | 4 | 4 | 2 | 34 |
| Mucinous | 4 | 1 | 1 | 1 | 3 | 0 | 6 | 3 | 0 | 0 | 0 | 6 |
| Endometroid | 21 | 3 | 2 | 4 | 7 | 1 | 28 | 5 | 2 | 2 | 1 | 28 |
Fifty-two ovarian tumours were analyzed by immunohistochemistry, FISH and mutation status for EGFR (ErBb-1) and HER2-neu (ErBb-2). The IHC scores and definition of gene amplification are specified in the methods section. For EGFR no amplification was found. For HER2-neu the gene copy number was only examined in the 6 cancers with 2/3+ IHC.
N = number of cases, P = "high polysomy", 0 = absent, TKD = tyrosine kinase domain.
Figure 1Immunohistochemical and FISH analysis of EGFR and HER2-neu on ovarian tumours. A-C : Immunohistochemistry for EGFR and HER2-neu protein expression on paraffin sections from ovarian tumours (all 400× magnification). Examples of an EGFR score 0 (A), EGFR 3+ overexpression (B) and HER2-neu 3+ overexpression (C). D-F : Fluorescence in situ hybridisation for the EGFR and HER2-neu gene on frozen sections from ovarian tumours (all 630× magnification). Examples of a tumour without EGFR amplification (D), a tumour showing polysomy 7 (E) and a tumour with HER2-neu amplification showing clusters of multiple gene copies (F).
EGFR and HER2- neu immunohistochemical expression
| N = 31 | EGFR | ||||
| HER2-neu | 0 | 1+ | 2+ | 3+ | |
| 0 | 7 | 4 | 6 | 1 | |
| 1+ | 2 | 2 | 2 | 1 | |
| 2+ | 1 | 2 | 0 | 0 | |
| 3+ | 1 | 0 | 1 | 1 | |
EGFR and HER2-neu FISH results
| EGFR (N = 27) | ||||
| HER2-neu (N = 6) | ≤ 2* | High polysomy § | Amplification** | |
| ≤ 2* | 20 | 4 | 0 | |
| Amplification** | 3 | 0 | 0 | |
* Gene copy number, §as defined in [[14]].
** As defined in Methods.