Literature DB >> 18177735

Identification and functional characterization of a novel splicing mutation in RP gene PRPF31.

Jing Yu Liu1, Xiaohua Dai, Jiqun Sheng, Xin Cui, Xu Wang, Xueqing Jiang, Xin Tu, Zhaohui Tang, Yan Bai, Mugen Liu, Qing K Wang.   

Abstract

A six-generation Chinese family with autosomal dominant retinitis pigmentosa (adRP) was identified and characterized. Genome-wide linkage analysis linked the family to markers D19S601 to D19S605, which span the PRPF31 gene on chromosome 19q13.33-13.43 (RP11) (LOD=5.03). Direct DNA sequence analysis identified a novel splicing mutation (IVS1+1G>T) in affected family members and carriers, but not in unaffected family members and 200 normal controls. The splicing mutation occurs at the splicing donor of intron 1. Real time PCR with lymphoblastoid RNA samples from family members showed that in comparison to normal family members, the splicing mutation reduced the expression level of the PRPF31 mRNA by 57% in symptomatic patients and by 28% in clinically asymptomatic carriers. Our studies identify a novel splicing mutation in PRPF31 associated with adRP and suggest that the penetrance of RP11 mutations may be correlated with the expression level of the PRPF31 mRNA.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18177735      PMCID: PMC2712755          DOI: 10.1016/j.bbrc.2007.12.156

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  16 in total

1.  A large deletion in the adRP gene PRPF31: evidence that haploinsufficiency is the cause of disease.

Authors:  Leen Abu-Safieh; Eranga N Vithana; Irmela Mantel; Graham E Holder; Lucia Pelosini; Alan C Bird; Shomi S Bhattacharya
Journal:  Mol Vis       Date:  2006-04-18       Impact factor: 2.367

2.  Comprehensive proteomic analysis of the human spliceosome.

Authors:  Zhaolan Zhou; Lawrence J Licklider; Steven P Gygi; Robin Reed
Journal:  Nature       Date:  2002-09-12       Impact factor: 49.962

3.  RP11 is the second most common locus for dominant retinitis pigmentosa.

Authors:  E Vithana; M Al-Maghtheh; S S Bhattacharya; C F Inglehearn
Journal:  J Med Genet       Date:  1998-02       Impact factor: 6.318

4.  Novel CACNA1S mutation causes autosomal dominant hypokalemic periodic paralysis in a Chinese family.

Authors:  Qiufen Wang; Mugen Liu; Chunsheng Xu; Zhaohui Tang; Yuhua Liao; Rong Du; Wei Li; Xiaoyan Wu; Xu Wang; Ping Liu; Xianqin Zhang; Jianfang Zhu; Xiang Ren; Tie Ke; Qing Wang; Junguo Yang
Journal:  J Mol Med (Berl)       Date:  2005-02-22       Impact factor: 4.599

5.  Prevalence of retinitis pigmentosa in urban and rural adult Chinese: The Beijing Eye Study.

Authors:  L Xu; L Hu; K Ma; J Li; J B Jonas
Journal:  Eur J Ophthalmol       Date:  2006 Nov-Dec       Impact factor: 2.597

6.  Variation in retinitis pigmentosa-11 (PRPF31 or RP11) gene expression between symptomatic and asymptomatic patients with dominant RP11 mutations.

Authors:  Carlo Rivolta; Terri L McGee; Thomas Rio Frio; Roderick V Jensen; Eliot L Berson; Thaddeus P Dryja
Journal:  Hum Mutat       Date:  2006-07       Impact factor: 4.878

7.  Mutation c. 1142 del G in the PRPF31 gene in a family with autosomal dominant retinitis pigmentosa (RP11) and its implications.

Authors:  Kurenai Taira; Mitsuru Nakazawa; Motoya Sato
Journal:  Jpn J Ophthalmol       Date:  2007-02-09       Impact factor: 2.447

8.  Novel deletion in the pre-mRNA splicing gene PRPF31 causes autosomal dominant retinitis pigmentosa in a large Chinese family.

Authors:  Lejin Wang; Michael Ribaudo; Kanxing Zhao; Ning Yu; Qiuyun Chen; Qiuxiang Sun; Liming Wang; Qing Wang
Journal:  Am J Med Genet A       Date:  2003-09-01       Impact factor: 2.802

9.  A novel PRPF31 splice-site mutation in a Chinese family with autosomal dominant retinitis pigmentosa.

Authors:  Kun Xia; Duo Zheng; Qian Pan; Zheng Liu; Xinghua Xi; Zhengmao Hu; Hao Deng; Xiaoping Liu; Deyong Jiang; Hanxiang Deng; Jiahui Xia
Journal:  Mol Vis       Date:  2004-05-20       Impact factor: 2.367

10.  Molecular genetics of retinitis pigmentosa in two Romani (Gypsy) families.

Authors:  Christina F Chakarova; Sylvia Cherninkova; Ivailo Tournev; Naushin Waseem; Radka Kaneva; Albena Jordanova; Brotati K Veraitch; Bhavdip Gill; Tracy Colclough; Anastasia Nakova; Alexander Oscar; Violeta Mihaylova; Amelia Nikolova-Hill; Alan F Wright; Graeme C M Black; Simon Ramsden; Ivo Kremensky; Shomi S Bhattacharya
Journal:  Mol Vis       Date:  2006-08-11       Impact factor: 2.367

View more
  11 in total

1.  Whole exome sequencing of a dominant retinitis pigmentosa family identifies a novel deletion in PRPF31.

Authors:  Adda Villanueva; Jason R Willer; Julien Bryois; Emmanouil T Dermitzakis; Nicholas Katsanis; Erica E Davis
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-04-07       Impact factor: 4.799

Review 2.  Where genotype is not predictive of phenotype: towards an understanding of the molecular basis of reduced penetrance in human inherited disease.

Authors:  David N Cooper; Michael Krawczak; Constantin Polychronakos; Chris Tyler-Smith; Hildegard Kehrer-Sawatzki
Journal:  Hum Genet       Date:  2013-07-03       Impact factor: 4.132

Review 3.  Prevalence and novelty of PRPF31 mutations in French autosomal dominant rod-cone dystrophy patients and a review of published reports.

Authors:  Isabelle Audo; Kinga Bujakowska; Saddek Mohand-Saïd; Marie-Elise Lancelot; Veselina Moskova-Doumanova; Naushin H Waseem; Aline Antonio; José-Alain Sahel; Shomi S Bhattacharya; Christina Zeitz
Journal:  BMC Med Genet       Date:  2010-10-12       Impact factor: 2.103

4.  A single-base substitution within an intronic repetitive element causes dominant retinitis pigmentosa with reduced penetrance.

Authors:  Thomas Rio Frio; Terri L McGee; Nicholas M Wade; Christian Iseli; Jacques S Beckmann; Eliot L Berson; Carlo Rivolta
Journal:  Hum Mutat       Date:  2009-09       Impact factor: 4.878

5.  Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families.

Authors:  Liping Yang; Xiaobei Yin; Lemeng Wu; Ningning Chen; Huirong Zhang; Genlin Li; Zhizhong Ma
Journal:  BMJ Open       Date:  2013-11-07       Impact factor: 2.692

6.  A Study into the Evolutionary Divergence of the Core Promoter Elements of PRPF31 and TFPT.

Authors:  Anna M Rose; Amna Z Shah; Giovanna Alfano; Kinga M Bujakowska; Amy F Barker; J Louis Robertson; Sufia Rahman; Lourdes Valdés Sánchez; Francisco J Diaz-Corrales; Christina F Chakarova; Abhay Krishna; Shomi S Bhattacharya
Journal:  J Mol Genet Med       Date:  2013-08

7.  Dominant PRPF31 mutations are hypostatic to a recessive CNOT3 polymorphism in retinitis pigmentosa: a novel phenomenon of "linked trans-acting epistasis".

Authors:  Anna M Rose; Amna Z Shah; Giulia Venturini; Carlo Rivolta; Geoffrey E Rose; Shomi S Bhattacharya
Journal:  Ann Hum Genet       Date:  2013-10-14       Impact factor: 1.670

Review 8.  Mutation spectrum of PRPF31, genotype-phenotype correlation in retinitis pigmentosa, and opportunities for therapy.

Authors:  Gabrielle Wheway; Andrew Douglas; Diana Baralle; Elsa Guillot
Journal:  Exp Eye Res       Date:  2020-01-31       Impact factor: 3.467

9.  Evaluation of splicing efficiency in lymphoblastoid cell lines from patients with splicing-factor retinitis pigmentosa.

Authors:  Lenka Ivings; Katherine V Towns; M A Matin; Charles Taylor; Frederique Ponchel; Richard J Grainger; Rajkumar S Ramesar; David A Mackey; Chris F Inglehearn
Journal:  Mol Vis       Date:  2008-12-18       Impact factor: 2.367

10.  Clinical Evidence for the Importance of the Wild-Type PRPF31 Allele in the Phenotypic Expression of RP11.

Authors:  Danial Roshandel; Jennifer A Thompson; Rachael C Heath Jeffery; Dan Zhang; Tina M Lamey; Terri L McLaren; John N De Roach; Samuel McLenachan; David A Mackey; Fred K Chen
Journal:  Genes (Basel)       Date:  2021-06-14       Impact factor: 4.096

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.