Literature DB >> 18175912

Up-regulation of genes related to the ubiquitin-proteasome system in the brown adipose tissue of 24-h-fasted rats.

Yuji Nakai1, Hiroko Hashida, Koji Kadota, Michiko Minami, Kentaro Shimizu, Ichiro Matsumoto, Hisanori Kato, Keiko Abe.   

Abstract

The functional balance between brown adipose tissue (BAT) and white adipose tissue (WAT) is important for metabolic homeostasis. We compared the effects of fasting on the gene expression profiles in BAT, WAT and liver by using a DNA microarray analysis. Tissues were obtained from rats that had been fed or fasted for 24 h. Taking the false discovery rate into account, we extracted the top 1,000 genes that had been differentially expressed between the fed and fasted rats. In all three tissues, a Gene Ontology analysis revealed that the lipid and protein biosynthesis-related genes had been markedly down-regulated. The whole-body fuel shift from glucose to triacylglycerol and the induction of autophagy were also observed. There was marked up-regulation of genes in the 'protein ubiquitination' category particularly in BAT of the fasted rats, suggesting that the ubiquitin-proteasome system was involved in saving energy as an adaptation to food shortage.

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Year:  2008        PMID: 18175912     DOI: 10.1271/bbb.70508

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  13 in total

1.  Evaluating methods for ranking differentially expressed genes applied to microArray quality control data.

Authors:  Koji Kadota; Kentaro Shimizu
Journal:  BMC Bioinformatics       Date:  2011-06-06       Impact factor: 3.169

2.  Genes and biochemical pathways in human skeletal muscle affecting resting energy expenditure and fuel partitioning.

Authors:  Xuxia Wu; Amit Patki; Cristina Lara-Castro; Xiangqin Cui; Kui Zhang; R Grace Walton; Michael V Osier; Gary L Gadbury; David B Allison; Mitchell Martin; W Timothy Garvey
Journal:  J Appl Physiol (1985)       Date:  2010-11-25

3.  Dysregulation of Lipid and Glucose Homeostasis in Hepatocyte-Specific SLC25A34 Knockout Mice.

Authors:  Nairita Roy; Frances Alencastro; Bayley A Roseman; Sierra R Wilson; Evan R Delgado; Meredith C May; Bharat Bhushan; Fiona M Bello; Michael J Jurczak; Sruti Shiva; Joseph Locker; Sebastien Gingras; Andrew W Duncan
Journal:  Am J Pathol       Date:  2022-06-16       Impact factor: 5.770

4.  Extrinsic and intrinsic regulation of DOR/TP53INP2 expression in mice: effects of dietary fat content, tissue type and sex in adipose and muscle tissues.

Authors:  Carolin Fromm-Dornieden; Oleksandr Lytovchenko; Silvia von der Heyde; Nina Behnke; Sebastian Hogl; Janina Berghoff; Frederik Köpper; Lennart Opitz; Ulla Renne; Andreas Hoeflich; Tim Beissbarth; Bertram Brenig; Bernhard G Baumgartner
Journal:  Nutr Metab (Lond)       Date:  2012-09-21       Impact factor: 4.169

5.  High phosphorus diet-induced changes in NaPi-IIb phosphate transporter expression in the rat kidney: DNA microarray analysis.

Authors:  Tatsuya Suyama; Shinji Okada; Tomoko Ishijima; Kota Iida; Keiko Abe; Yuji Nakai
Journal:  PLoS One       Date:  2012-01-03       Impact factor: 3.240

Review 6.  Omics and integrated omics for the promotion of food and nutrition science.

Authors:  Hisanori Kato; Shoko Takahashi; Kenji Saito
Journal:  J Tradit Complement Med       Date:  2011-10

7.  Transcriptome profiling of the feeding-to-fasting transition in chicken liver.

Authors:  Colette Désert; Michel J Duclos; Pierre Blavy; Frédéric Lecerf; François Moreews; Christophe Klopp; Marc Aubry; Frédéric Herault; Pascale Le Roy; Cécile Berri; Madeleine Douaire; Christian Diot; Sandrine Lagarrigue
Journal:  BMC Genomics       Date:  2008-12-17       Impact factor: 3.969

8.  Mice deficient in the respiratory chain gene Cox6a2 are protected against high-fat diet-induced obesity and insulin resistance.

Authors:  Roel Quintens; Sarvjeet Singh; Katleen Lemaire; Katrien De Bock; Mikaela Granvik; Anica Schraenen; Irene Olga Cornelia Maria Vroegrijk; Veronica Costa; Pieter Van Noten; Dennis Lambrechts; Stefan Lehnert; Leentje Van Lommel; Lieven Thorrez; Geoffroy De Faudeur; Johannes Anthonius Romijn; John Michael Shelton; Luca Scorrano; Henri Roger Lijnen; Peter Jacobus Voshol; Peter Carmeliet; Pradeep Puthenveetil Abraham Mammen; Frans Schuit
Journal:  PLoS One       Date:  2013-02-27       Impact factor: 3.240

9.  Ranking differentially expressed genes from Affymetrix gene expression data: methods with reproducibility, sensitivity, and specificity.

Authors:  Koji Kadota; Yuji Nakai; Kentaro Shimizu
Journal:  Algorithms Mol Biol       Date:  2009-04-22       Impact factor: 1.405

10.  Metabolite and transcriptome analysis during fasting suggest a role for the p53-Ddit4 axis in major metabolic tissues.

Authors:  Michael Schupp; Fang Chen; Erika R Briggs; Shilpa Rao; Helmut J Pelzmann; Ariane R Pessentheiner; Juliane G Bogner-Strauss; Mitchell A Lazar; Don Baldwin; Andreas Prokesch
Journal:  BMC Genomics       Date:  2013-11-05       Impact factor: 3.969

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