Literature DB >> 18175717

Comamonas composti sp. nov., isolated from food waste compost.

Chiu-Chung Young1, Jui-Hsing Chou, A B Arun, Wen-Shao Yen, Shih-Yi Sheu, Fo-Ting Shen, Wai-An Lai, P D Rekha, Wen-Ming Chen.   

Abstract

A bacterial strain designated YY287(T), isolated from food waste compost, was investigated by polyphasic taxonomic approach. The cells were rod-shaped, Gram-negative, non-pigmented, non-spore-forming and non-fermentative. Phylogenetic analyses using the 16S rRNA gene sequence showed that the strain formed a monophyletic branch towards the periphery of the evolutionary radiation occupied by the genus Comamonas; its closest neighbours were the type strains Comamonas testosteroni DSM 50244(T) (96.5%), Comamonas terrigena DSM 7099(T) (95.4%), Comamonas odontotermitis Dant 3-8(T) (95.2%) and Comamonas koreensis KCTC 12005(T) (94.6%). Strain YY287(T) was clearly distinguished from all of these strains using phylogenetic analysis, DNA-DNA hybridization, fatty acid composition data and a range of physiological and biochemical characteristics. The major fatty acids were 16:0 (33%), 18:1omega7c (13%) and summed feature 3 (16:1omega7c and/or 15:0 iso 2-OH; 41%). The DNA G+C content of the genomic DNA was 62.8 mol%. It is evident from the genotypic and phenotypic data that strain YY287(T) represents a novel species in the genus Comamonas, for which the name Comamonas composti sp. nov. is proposed. The type strain is YY287(T) (=BCRC 17659(T)=LMG 24008(T)).

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Year:  2008        PMID: 18175717     DOI: 10.1099/ijs.0.65277-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Comamonas faecalis sp. nov., isolated from domestic pig feces.

Authors:  Daniel Kim; Sang-Seob Lee
Journal:  Curr Microbiol       Date:  2014-03-16       Impact factor: 2.188

2.  Characterization of Comamonas thiooxidans sp. nov., and comparison of thiosulfate oxidation with Comamonas testosteroni and Comamonas composti.

Authors:  Kunwar Digvijay Narayan; Shachindra K Pandey; Subrata K Das
Journal:  Curr Microbiol       Date:  2010-02-11       Impact factor: 2.188

3.  A novel bacterial symbiont in the nematode Spirocerca lupi.

Authors:  Yuval Gottlieb; Eran Lavy; Meira Kaufman; Alex Markovics; Murad Ghanim; Itamar Aroch
Journal:  BMC Microbiol       Date:  2012-07-05       Impact factor: 3.605

4.  Assessment of bacterial diversity during composting of agricultural byproducts.

Authors:  Piyush Chandna; Lata Nain; Surender Singh; Ramesh Chander Kuhad
Journal:  BMC Microbiol       Date:  2013-05-07       Impact factor: 3.605

5.  Improved properties of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) produced by Comamonas sp. EB172 utilizing volatile fatty acids by regulating the nitrogen source.

Authors:  Mohd Rafein Zakaria; Hidayah Ariffin; Suraini Abd-Aziz; Mohd Ali Hassan; Yoshihito Shirai
Journal:  Biomed Res Int       Date:  2013-09-11       Impact factor: 3.411

  5 in total

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