Literature DB >> 18175124

Challenges of using mass spectrometry as a bladder cancer biomarker discovery platform.

Eric Schiffer1, Harald Mischak, Dan Theodorescu, Antonia Vlahou.   

Abstract

INTRODUCTION: Bladder cancer (BCa) is one of the most prevalent malignancies worldwide, mostly due to its high recurrence rates. In consequence, the necessity of repeated screening for reappearance demonstrates the urgent need for novel biomarkers as alternatives to invasive standard procedures.
METHODS: Proteomic technologies have emerged as powerful platforms for unbiased biomarker discovery and revolutionized the classical "target-driven" analysis of single marker candidates. Although proteome profiling is still far from demonstrating its full potential in clinical diagnosis, first studies clearly denote its significant potential.
CONCLUSIONS: This review provides a discussion of the challenges related to clinical proteomics using mass spectrometry, emphasizing bladder cancer biomarker discovery. An outline of the technological prerequisites for reliable proteome profiling, data mining and interpretation, as well as, reflections on future trends in the field are provided.

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Year:  2008        PMID: 18175124     DOI: 10.1007/s00345-007-0234-z

Source DB:  PubMed          Journal:  World J Urol        ISSN: 0724-4983            Impact factor:   4.226


  85 in total

Review 1.  The role of separation science in proteomics research.

Authors:  H J Issaq
Journal:  Electrophoresis       Date:  2001-10       Impact factor: 3.535

Review 2.  Methods for fractionation, separation and profiling of proteins and peptides.

Authors:  Haleem J Issaq; Thomas P Conrads; George M Janini; Timothy D Veenstra
Journal:  Electrophoresis       Date:  2002-09       Impact factor: 3.535

3.  Proteome analysis of gelatin-bound urinary proteins from patients with bladder cancers.

Authors:  Minoru Saito; Masafumi Kimoto; Teruo Araki; Yukie Shimada; Ryoji Fujii; Ken Oofusa; Michihiro Hide; Tsuguru Usui; Katsutoshi Yoshizato
Journal:  Eur Urol       Date:  2005-11       Impact factor: 20.096

Review 4.  Antibody arrays: technical considerations and clinical applications in cancer.

Authors:  Marta Sanchez-Carbayo
Journal:  Clin Chem       Date:  2006-06-29       Impact factor: 8.327

5.  ProteinChip technology reveals distinctive protein expression profiles in the urine of bladder cancer patients.

Authors:  J Mueller; F von Eggeling; D Driesch; J Schubert; C Melle; K Junker
Journal:  Eur Urol       Date:  2005-03-11       Impact factor: 20.096

Review 6.  Mass spectrometric approaches for the identification of gel-separated proteins.

Authors:  S D Patterson; R Aebersold
Journal:  Electrophoresis       Date:  1995-10       Impact factor: 3.535

7.  Combined top-down and bottom-up mass spectrometric approach to characterization of biomarkers for renal disease.

Authors:  Michael J Chalmers; Colin Logan Mackay; Christopher L Hendrickson; Stefan Wittke; Michael Walden; Harald Mischak; Danilo Fliser; Ingo Just; Alan G Marshall
Journal:  Anal Chem       Date:  2005-11-15       Impact factor: 6.986

Review 8.  Capillary electrophoresis-mass spectrometry as a powerful tool in clinical diagnosis and biomarker discovery.

Authors:  Walter Kolch; Christian Neusüss; Matthias Pelzing; Harald Mischak
Journal:  Mass Spectrom Rev       Date:  2005 Nov-Dec       Impact factor: 10.946

9.  Discovery and validation of new protein biomarkers for urothelial cancer: a prospective analysis.

Authors:  Dan Theodorescu; Stefan Wittke; Mark M Ross; Michael Walden; Mark Conaway; Ingo Just; Harald Mischak; Henry F Frierson
Journal:  Lancet Oncol       Date:  2006-03       Impact factor: 41.316

10.  Predicting the clinical outcome of congenital unilateral ureteropelvic junction obstruction in newborn by urinary proteome analysis.

Authors:  Stephane Decramer; Stefan Wittke; Harald Mischak; Petra Zürbig; Michael Walden; François Bouissou; Jean-Loup Bascands; Joost P Schanstra
Journal:  Nat Med       Date:  2006-03-19       Impact factor: 53.440

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  5 in total

1.  Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profiles.

Authors:  Masahiro Sugimoto; David T Wong; Akiyoshi Hirayama; Tomoyoshi Soga; Masaru Tomita
Journal:  Metabolomics       Date:  2009-09-10       Impact factor: 4.290

Review 2.  Potential new urinary markers in the early detection of bladder cancer.

Authors:  Samir P Shirodkar; Vinata B Lokeshwar
Journal:  Curr Opin Urol       Date:  2009-09       Impact factor: 2.309

3.  Sources of Urinary Proteins and their Analysis by Urinary Proteomics for the Detection of Biomarkers of Disease.

Authors:  Bruce A Julian; Hitoshi Suzuki; Yusuke Suzuki; Yasuhiko Tomino; Goce Spasovski; Jan Novak
Journal:  Proteomics Clin Appl       Date:  2009-08-26       Impact factor: 3.494

Review 4.  Approaches to the discovery of non-invasive urinary biomarkers of prostate cancer.

Authors:  Andrej Jedinak; Kevin R Loughlin; Marsha A Moses
Journal:  Oncotarget       Date:  2018-08-21

Review 5.  Hydroxymethylation and tumors: can 5-hydroxymethylation be used as a marker for tumor diagnosis and treatment?

Authors:  Tianmin Xu; Haoyue Gao
Journal:  Hum Genomics       Date:  2020-05-06       Impact factor: 4.639

  5 in total

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