Literature DB >> 18166240

Completion of the genome analysis of snake adenovirus type 1, a representative of the reptilian lineage within the novel genus Atadenovirus.

Szilvia L Farkas1, Balázs Harrach, Mária Benko.   

Abstract

Genome sequencing and analysis of snake adenovirus type 1 (SnAdV-1), originating from corn snake, were completed. This is the first full genomic sequence of an adenovirus from reptilian hosts. The presence of characteristic genus-common genes and transcription units, showed that SnAdV-1 shares similar genome organisation with members of the recently established genus Atadenovirus. Three novel open reading frames of yet unknown functions were found. One of these seemed to be related to a putative gene, the so-called 105R that has recently been described from the genome of the tree shrew adenovirus. The other two putative genes were found to be unique for SnAdV-1. On phylogenetic trees, SnAdV-1 clustered within the atadenovirus clade. Thereby the hypothesis on the reptilian origin of atadenoviruses was further strengthened. Interestingly, however, one of the most striking features of atadenoviruses, namely the base content heavily biased towards A+T, is not characteristic for SnAdV-1 having a genome of balanced composition with a G+C value of 50.21%.

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Year:  2007        PMID: 18166240     DOI: 10.1016/j.virusres.2007.11.009

Source DB:  PubMed          Journal:  Virus Res        ISSN: 0168-1702            Impact factor:   3.303


  15 in total

1.  Genome analysis of bat adenovirus 2: indications of interspecies transmission.

Authors:  Claudia Kohl; Márton Z Vidovszky; Kristin Mühldorfer; Piotr Wojtek Dabrowski; Aleksandar Radonić; Andreas Nitsche; Gudrun Wibbelt; Andreas Kurth; Balázs Harrach
Journal:  J Virol       Date:  2011-11-30       Impact factor: 5.103

2.  Crystallization of the C-terminal domain of the fibre protein from snake adenovirus 1, an atadenovirus.

Authors:  Abhimanyu K Singh; Rosa Menéndez-Conejero; Carmen San Martín; Mark J van Raaij
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-11-29

3.  Molecular characterization of a lizard adenovirus reveals the first atadenovirus with two fiber genes and the first adenovirus with either one short or three long fibers per penton.

Authors:  Judit J Pénzes; Rosa Menéndez-Conejero; Gabriela N Condezo; Inna Ball; Tibor Papp; Andor Doszpoly; Alberto Paradela; Ana J Pérez-Berná; María López-Sanz; Thanh H Nguyen; Mark J van Raaij; Rachel E Marschang; Balázs Harrach; Mária Benkő; Carmen San Martín
Journal:  J Virol       Date:  2014-07-23       Impact factor: 5.103

Review 4.  Viruses infecting reptiles.

Authors:  Rachel E Marschang
Journal:  Viruses       Date:  2011-11-01       Impact factor: 5.048

5.  Genetic and Molecular Epidemiological Characterization of a Novel Adenovirus in Antarctic Penguins Collected between 2008 and 2013.

Authors:  Sook-Young Lee; Jeong-Hoon Kim; Tae-Kun Seo; Jin Sun No; Hankyeom Kim; Won-Keun Kim; Han-Gu Choi; Sung-Ho Kang; Jin-Won Song
Journal:  PLoS One       Date:  2016-06-16       Impact factor: 3.240

6.  Random Sampling of Squamate Reptiles in Spanish Natural Reserves Reveals the Presence of Novel Adenoviruses in Lacertids (Family Lacertidae) and Worm Lizards (Amphisbaenia).

Authors:  Leonóra Szirovicza; Pilar López; Renáta Kopena; Mária Benkő; José Martín; Judit J Pénzes
Journal:  PLoS One       Date:  2016-07-11       Impact factor: 3.240

7.  Phylogenetic analyses of novel squamate adenovirus sequences in wild-caught Anolis lizards.

Authors:  Jill M Ascher; Anthony J Geneva; Julienne Ng; Jeffrey D Wyatt; Richard E Glor
Journal:  PLoS One       Date:  2013-04-10       Impact factor: 3.240

8.  Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3.

Authors:  Abhimanyu K Singh; M Álvaro Berbís; Mónika Z Ballmann; Michelle Kilcoyne; Margarita Menéndez; Thanh H Nguyen; Lokesh Joshi; F Javier Cañada; Jesús Jiménez-Barbero; Mária Benkő; Balázs Harrach; Mark J van Raaij
Journal:  PLoS One       Date:  2015-09-29       Impact factor: 3.240

9.  A novel adenovirus in Chinstrap penguins (Pygoscelis antarctica) in Antarctica.

Authors:  Sook-Young Lee; Jeong-Hoon Kim; Yon Mi Park; Ok Sarah Shin; Hankyeom Kim; Han-Gu Choi; Jin-Won Song
Journal:  Viruses       Date:  2014-05-07       Impact factor: 5.048

10.  Crystal structure of the fibre head domain of the Atadenovirus Snake Adenovirus 1.

Authors:  Abhimanyu K Singh; Rosa Menéndez-Conejero; Carmen San Martín; Mark J van Raaij
Journal:  PLoS One       Date:  2014-12-08       Impact factor: 3.240

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