Literature DB >> 18165865

Analysis of cytokine gene polymorphisms in recipient's matched with living donors on acute rejection after renal transplantation.

Parmeet Kaur Manchanda1, Rama Devi Mittal.   

Abstract

Despite advances in immunosuppressive therapy in last few years, allograft rejection still remains the concern for kidney graft failure. Cytokines are key mediators in the induction and effector phases of all immune and inflammatory responses. They are not allospecific so both recipient as well as donor cells may be subjected to cytokine changes. We sought to ascertain whether IL-1B -511, IL-1B +3954, TNF-A -308, TGF-B Codon 10 and 25, IL-2 -330, IL-6 -174, IL-10 -1082, IL-10 -819 (SNPs), IL-1RN, IL-4 (VNTR) and TGF-B C-del (deletion) genes in two hundred subjects including recipients and their live matched donors influence renal allograft outcome. Screening was performed using PCR-RFLP and amplification refractory mutation system (ARMS-PCR). The risk for rejection appeared significant amongst recipients for pro-inflammatory cytokines IL-1B + 3954 (P = 0.045) and TNF-A -308 (0.031). No association of cytokine gene variants with rejection was observed in donors group. Further evaluating combinational effect of TNF-A (-308), IL-4 and IL-10 (-819) genes with the risk of allograft rejection showed no additive influence. Haplotype analysis between IL-1 gene cluster, TGF-B Codon 10 and 25 and IL-10 -1082 and -819 revealed that haplotypes of IL-1 gene 240-T-C, 410-T-C and 410-T-T showed very high risk among the recipients (>16, >5 and >12 folds risk respectively) when compared to donors. Interestingly, all these three haplotypes contained the variant allele T* of IL-B -511. In conclusion, our results suggest that high producing genotypes of pro-inflammatory cytokine genes in recipients have risk for allograft rejection. Lack of association in donors may be suggestive of having no conspicuous role in allograft outcome. Further analysis of diversity in haplotype variations in large populations could conceivably provide the basis for defined approaches to limit the rejections.

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Year:  2007        PMID: 18165865     DOI: 10.1007/s11010-007-9694-0

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  37 in total

1.  ARMS-PCR methodologies to determine IL-10, TNF-alpha, TNF-beta and TGF-beta 1 gene polymorphisms.

Authors:  C Perrey; S J Turner; V Pravica; W M Howell; I V Hutchinson
Journal:  Transpl Immunol       Date:  1999-06       Impact factor: 1.708

2.  Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data.

Authors:  D Fallin; N J Schork
Journal:  Am J Hum Genet       Date:  2000-08-22       Impact factor: 11.025

3.  Ethnicity greatly influences cytokine gene polymorphism distribution.

Authors:  Steven C Hoffmann; Eran M Stanley; E Darrin Cox; Barbara S DiMercurio; Deloris E Koziol; David M Harlan; Allan D Kirk; Patrick J Blair
Journal:  Am J Transplant       Date:  2002-07       Impact factor: 8.086

4.  Combined analysis of cytokine genotype polymorphism and the level of expression with allograft function in African-American renal transplant patients.

Authors:  D O McDaniel; W H Barber; C Nguyan; S W Rhodes; W L May; L S McDaniel; P J S Vig; L L Jemeson; D E Butkus
Journal:  Transpl Immunol       Date:  2003 Jan-Mar       Impact factor: 1.708

5.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

6.  Intragraft mRNA expression of cytokines and growth factors in human kidney allograft biopsies by in situ RT-PCR analysis.

Authors:  D Kaminska; B Tyran; O Mazanowska; W Letachowicz; A Kochman; J Rabczynski; P Szyber; D Patrzalek; P Chudoba; M Klinger
Journal:  Transplant Proc       Date:  2005-03       Impact factor: 1.066

7.  Cytokine polymorphisms do not influence acute rejection in renal transplantation under tacrolimus-based immunosuppression.

Authors:  M Loucaidou; J Stitchbury; J Lee; R Borrows; S E Marshall; A G McLean; T Cairns; M Griffith; N Hakim; A Palmer; V Papalois; K Welsh; D Taube
Journal:  Transplant Proc       Date:  2005-05       Impact factor: 1.066

8.  Nucleotide variation, haplotype structure, and association with end-stage renal disease of the human interleukin-1 gene cluster.

Authors:  Jeannette T Bensen; Carl D Langefeld; Gregory A Hawkins; Linda E Green; Josyf C Mychaleckyj; Catherine S Brewer; Deborah S Kiger; Scott M Binford; Carla J Colicigno; Dax C Allred; Barry I Freedman; Donald W Bowden
Journal:  Genomics       Date:  2003-08       Impact factor: 5.736

9.  TGF-beta1 gene mutations in insulin-dependent diabetes mellitus and diabetic nephropathy.

Authors:  F Pociot; P M Hansen; A E Karlsen; B L Langdahl; J Johannesen; J Nerup
Journal:  J Am Soc Nephrol       Date:  1998-12       Impact factor: 10.121

10.  TNF-alpha and TGF-beta1 gene polymorphisms and renal allograft rejection in Koreans.

Authors:  J-Y Park; M H Park; H Park; J Ha; S J Kim; C Ahn
Journal:  Tissue Antigens       Date:  2004-12
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  12 in total

1.  Validation of single nucleotide polymorphisms associated with acute rejection in kidney transplant recipients using a large multi-center cohort.

Authors:  William S Oetting; David P Schladt; Robert E Leduc; Pamala A Jacobson; Weihua Guan; Arthur J Matas; Ajay Israni
Journal:  Transpl Int       Date:  2011-09-29       Impact factor: 3.782

2.  Analysis of 75 Candidate SNPs Associated With Acute Rejection in Kidney Transplant Recipients: Validation of rs2910164 in MicroRNA MIR146A.

Authors:  William S Oetting; David P Schladt; Casey R Dorr; Baolin Wu; Weihua Guan; Rory P Remmel; David Iklé; Roslyn B Mannon; Arthur J Matas; Ajay K Israni; Pamala A Jacobson
Journal:  Transplantation       Date:  2019-08       Impact factor: 4.939

Review 3.  Genetics of acute rejection after kidney transplantation.

Authors:  Casey R Dorr; William S Oetting; Pamala A Jacobson; Ajay K Israni
Journal:  Transpl Int       Date:  2017-11-08       Impact factor: 3.782

4.  Empirical null distribution based modeling of multi-class differential gene expression detection.

Authors:  Xiting Cao; Baolin Wu; Marshall I Hertz
Journal:  J Appl Stat       Date:  2012-11-21       Impact factor: 1.404

Review 5.  Effect of cytokine and pharmacogenomic genetic polymorphisms in transplantation.

Authors:  Diana M Girnita; Gilbert Burckart; Adriana Zeevi
Journal:  Curr Opin Immunol       Date:  2008-08-28       Impact factor: 7.486

6.  Lack of Association between Interleukin-10 Gene Polymorphisms and Graft Rejection Risk in Kidney Transplantation Recipients: A Meta-Analysis.

Authors:  Jiachuan Xiong; Yiqin Wang; Ying Zhang; Ling Nie; Daihong Wang; Yunjian Huang; Bing Feng; Jingbo Zhang; Jinghong Zhao
Journal:  PLoS One       Date:  2015-06-02       Impact factor: 3.240

7.  Association Between Cytokines and Their Receptor Antagonist Gene Polymorphisms and Clinical Risk Factors and Acute Rejection Following Renal Transplantation.

Authors:  SIqing Ding; Jianfei Xie; Qiquan Wan
Journal:  Med Sci Monit       Date:  2016-12-03

8.  Peri- and Postoperative Treatment with the Interleukin-1 Receptor Antagonist Anakinra Is Safe in Patients Undergoing Renal Transplantation: Case Series and Review of the Literature.

Authors:  Catharina M Mulders-Manders; Marije C Baas; Femke M Molenaar; Anna Simon
Journal:  Front Pharmacol       Date:  2017-05-31       Impact factor: 5.810

9.  The Polymorphism -308G/A of Tumor Necrosis Factor-α Gene Modulates the Effect of Immunosuppressive Treatment in First Kidney Transplant Subjects Who Suffer an Acute Rejection.

Authors:  Ana Isabel Sánchez-Fructuoso; Isabel Pérez-Flores; Rosalia Valero; Maria Angeles Moreno; Miguel Fernandez-Arquero; Elena Urcelay; Cristina Fernández-Pérez; Jose Luis Santiago
Journal:  J Immunol Res       Date:  2016-09-29       Impact factor: 4.818

10.  Association of IL1 beta gene polymorphism and allograft functions in renal transplant recipients :a case control study from Kashmir Valley.

Authors:  Mohammad Ashraf Bhat; Manzoor Ahmad Parry; Saniya Nissar; Aga Syed Sameer; Imtiyaz A Bhat; Zafar A Shah; Roohi Rasool
Journal:  BMC Nephrol       Date:  2017-03-30       Impact factor: 2.388

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