Literature DB >> 18163650

Role of Phe1010 in light-induced structural changes of the neo1-LOV2 domain of Adiantum.

Atsushi Yamamoto1, Tatsuya Iwata, Satoru Tokutomi, Hideki Kandori.   

Abstract

Phototropin (phot) is a blue-light sensor protein that elicits several photo responses in plants. Phototropin has two flavin mononucleotide (FMN)-binding domains, LOV1 and LOV2, in its N-terminal half. The C-terminal half is a blue-light-regulated Ser/Thr kinase. Various functional studies have reported that only LOV2 is responsible for the kinase activity, whereas the X-ray crystallographic structures of the LOV1 and LOV2 domains are almost identical. How does such a functional difference emerge? Our previous FTIR study of the LOV domains of Adiantum neochrome1 (neo1) showed that light-induced protein structural changes are small and temperature independent for neo1-LOV1, whereas the structural changes are large and highly temperature dependent for neo1-LOV2, which involve loops, alpha-helices, and beta-sheets. These observations successfully explained the different functions in terms of protein structural changes. They also suggested the presence of some crucial amino acids responsible for greater protein structural changes in the LOV2 domain. Here, we focused on phenylalanine-1010 (Phe1010) in neo1-LOV2, where FMN is sandwiched between Phe1010 and the reactive cysteine. Phenylalanine at this position is conserved for LOV2 domains, while the corresponding amino acid is leucine for LOV1 domains in almost all plant phototropins. We observed that unlike wild-type LOV2, the FTIR spectra of F1010L LOV2 exhibited no temperature dependence in the alpha-helical and beta-sheet regions and that spectral changes in amide-I of these regions were significantly reduced, which was similar to LOV1. Thus, the replacement of phenylalanine with leucine converts neo1-LOV2 into neo1-LOV1 in terms of protein structural changes that must be related to the different functions. We will discuss the roles of phenylalanine and leucine in the LOV2 and LOV1 domains, respectively.

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Year:  2007        PMID: 18163650     DOI: 10.1021/bi701851v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Electronic and protein structural dynamics of a photosensory histidine kinase.

Authors:  Maxime T A Alexandre; Erin B Purcell; Rienk van Grondelle; Bruno Robert; John T M Kennis; Sean Crosson
Journal:  Biochemistry       Date:  2010-06-15       Impact factor: 3.162

2.  The amino-terminal helix modulates light-activated conformational changes in AsLOV2.

Authors:  Josiah P Zayner; Chloe Antoniou; Tobin R Sosnick
Journal:  J Mol Biol       Date:  2012-03-07       Impact factor: 5.469

Review 3.  LOV domain-containing F-box proteins: light-dependent protein degradation modules in Arabidopsis.

Authors:  Shogo Ito; Young Hun Song; Takato Imaizumi
Journal:  Mol Plant       Date:  2012-03-08       Impact factor: 13.164

4.  Kinetics of conformational changes of the FKF1-LOV domain upon photoexcitation.

Authors:  Yusuke Nakasone; Kazunori Zikihara; Satoru Tokutomi; Masahide Terazima
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

5.  Conformational heterogeneity and propagation of structural changes in the LOV2/Jalpha domain from Avena sativa phototropin 1 as recorded by temperature-dependent FTIR spectroscopy.

Authors:  Maxime T A Alexandre; Rienk van Grondelle; Klaas J Hellingwerf; John T M Kennis
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

6.  Fourier-transform infrared study of the photoactivation process of Xenopus (6-4) photolyase.

Authors:  Daichi Yamada; Yu Zhang; Tatsuya Iwata; Kenichi Hitomi; Elizabeth D Getzoff; Hideki Kandori
Journal:  Biochemistry       Date:  2012-07-13       Impact factor: 3.162

7.  Structure and Function of the ZTL/FKF1/LKP2 Group Proteins in Arabidopsis.

Authors:  Brian D Zoltowski; Takato Imaizumi
Journal:  Enzymes       Date:  2014

8.  Variations in protein-flavin hydrogen bonding in a light, oxygen, voltage domain produce non-Arrhenius kinetics of adduct decay.

Authors:  Brian D Zoltowski; Abigail I Nash; Kevin H Gardner
Journal:  Biochemistry       Date:  2011-09-21       Impact factor: 3.162

9.  Mechanism-based tuning of a LOV domain photoreceptor.

Authors:  Brian D Zoltowski; Brian Vaccaro; Brian R Crane
Journal:  Nat Chem Biol       Date:  2009-08-30       Impact factor: 15.040

10.  Light signal transduction pathway from flavin chromophore to the J alpha helix of Arabidopsis phototropin1.

Authors:  Atsushi Yamamoto; Tatsuya Iwata; Yoshiaki Sato; Daisuke Matsuoka; Satoru Tokutomi; Hideki Kandori
Journal:  Biophys J       Date:  2009-04-08       Impact factor: 4.033

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