Literature DB >> 18160131

Simultaneous measurements of fast optical and proton current kinetics in the bacteriorhodopsin photocycle using an enhanced spectrophotometer.

John W Kakareka1, Paul D Smith, Thomas J Pohida, Richard W Hendler.   

Abstract

A one-of-a-kind high speed optical multichannel spectrometer was designed and built at NIH and described in this journal in 1997 [J.W. Cole, R.W. Hendler, P.D. Smith, H.A. Fredrickson, T.J. Pohida, W.S. Friauf. A high speed optical multichannel analyzer. J Biochem Biophys Methods 1997;35:16-174.]. The most unique aspect of this instrument was the ability to follow an entire time course from a single activation using a single sample. The instrument has been used to study rapid kinetic processes in the photon-driven bacteriorhodopsin photocycle and electron transport from cytochrome c to cytochrome aa3 and from cytochrome aa3 to oxygen. The present paper describes a second generation instrument with a number of important enhancements which significantly improve its capabilities for multichannel kinetic studies. An example application is presented in which the kinetics of photon-induced proton flow across the biological membrane is measured simultaneously with the individual steps of the photocycle determined optically. Matching the time constants for the two processes indicates which molecular transformations are associated with major proton movements.

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Year:  2007        PMID: 18160131      PMCID: PMC2836842          DOI: 10.1016/j.jprot.2007.11.004

Source DB:  PubMed          Journal:  J Biochem Biophys Methods        ISSN: 0165-022X


  22 in total

1.  Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.

Authors:  C Rödig; I Chizhov; O Weidlich; F Siebert
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

2.  An apparent general solution for the kinetic models of the bacteriorhodopsin photocycles.

Authors:  Richard W Hendler
Journal:  J Phys Chem B       Date:  2005-09-01       Impact factor: 2.991

3.  Control of the integral membrane proton pump, bacteriorhodopsin, by purple membrane lipids of Halobacterium halobium.

Authors:  A K Mukhopadhyay; S Dracheva; S Bose; R W Hendler
Journal:  Biochemistry       Date:  1996-07-16       Impact factor: 3.162

4.  Spectrally silent transitions in the bacteriorhodopsin photocycle.

Authors:  I Chizhov; D S Chernavskii; M Engelhard; K H Mueller; B V Zubov; B Hess
Journal:  Biophys J       Date:  1996-11       Impact factor: 4.033

Review 5.  The ability of actinic light to modify the bacteriorhodopsin photocycle. Heterogeneity and/or photocooperativity?

Authors:  R I Shrager; R W Hendler; S Bose
Journal:  Eur J Biochem       Date:  1995-05-01

Review 6.  Deconvolutions based on singular value decomposition and the pseudoinverse: a guide for beginners.

Authors:  R W Hendler; R I Shrager
Journal:  J Biochem Biophys Methods       Date:  1994-01

7.  Multichannel analysis of single-turnover kinetics of cytochrome aa3 reduction of O2.

Authors:  S Bose; R W Hendler; R I Shrager; S I Chan; P D Smith
Journal:  Biochemistry       Date:  1997-03-04       Impact factor: 3.162

8.  Purple membrane lipid control of bacteriorhodopsin conformational flexibility and photocycle activity.

Authors:  Richard W Hendler; Steven M Barnett; Swetlana Dracheva; Salil Bose; Ira W Levin
Journal:  Eur J Biochem       Date:  2003-05

9.  Water structural changes in the L and M photocycle intermediates of bacteriorhodopsin as revealed by time-resolved step-scan Fourier transform infrared (FTIR) spectroscopy.

Authors:  Joel E Morgan; Ahmet S Vakkasoglu; Robert B Gennis; Akio Maeda
Journal:  Biochemistry       Date:  2007-02-15       Impact factor: 3.162

10.  Interconversions among four M-intermediates in the bacteriorhodopsin photocycle.

Authors:  Richard W Hendler; Salil Bose
Journal:  Eur J Biochem       Date:  2003-09
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  1 in total

1.  Infrared and visible absolute and difference spectra of bacteriorhodopsin photocycle intermediates.

Authors:  Richard W Hendler; Curtis W Meuse; Mark S Braiman; Paul D Smith; John W Kakareka
Journal:  Appl Spectrosc       Date:  2011-09       Impact factor: 2.388

  1 in total

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