Literature DB >> 18158914

Molecular modelling of miraculin: Structural analyses and functional hypotheses.

Antonella Paladino1, Susan Costantini, Giovanni Colonna, Angelo M Facchiano.   

Abstract

Miraculin is a plant protein that displays the peculiar property of modifying taste by swiching sour into a sweet taste. Its monomer is flavourless at all pH as well as at high concentration; the dimer form elicits its taste-modifying activity at acidic pH; a tetrameric form is also reported as active. Two histidine residues, located in exposed regions, are the main responsible of miraculin activity, as demonstrated by mutagenesis studies. Since structural data of miraculin are not available, we have predicted its three-dimensional structure and simulated both its dimer and tetramer forms by comparative modelling and molecular docking techniques. Finally, molecular dynamics simulations at different pH conditions have indicated that at acidic pH the dimer assumes a widely open conformation, in agreement with the hypotheses coming from other studies.

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Year:  2007        PMID: 18158914     DOI: 10.1016/j.bbrc.2007.12.102

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  10 in total

Review 1.  From miracle fruit to transgenic tomato: mass production of the taste-modifying protein miraculin in transgenic plants.

Authors:  Kyoko Hiwasa-Tanase; Tadayoshi Hirai; Kazuhisa Kato; Narendra Duhita; Hiroshi Ezura
Journal:  Plant Cell Rep       Date:  2011-12-08       Impact factor: 4.570

2.  Molecular characterization of a miraculin-like gene differentially expressed during coffee development and coffee leaf miner infestation.

Authors:  Jorge Maurício Costa Mondego; Melina Pasini Duarte; Eduardo Kiyota; Leandro Martínez; Sandra Rodrigues de Camargo; Fernanda P De Caroli; Beatriz Santos Capela Alves; Sandra Maria Carmello Guerreiro; Maria Luiza Vilela Oliva; Oliveiro Guerreiro-Filho; Marcelo Menossi
Journal:  Planta       Date:  2010-10-08       Impact factor: 4.116

3.  VMD DisRg: New User-Friendly Implement for calculation distance and radius of gyration in VMD program.

Authors:  Sajad Falsafi-Zadeh; Zahra Karimi; Hamid Galehdari
Journal:  Bioinformation       Date:  2012-04-13

4.  Structural and functional similarities between osmotin from Nicotiana tabacum seeds and human adiponectin.

Authors:  Marco Miele; Susan Costantini; Giovanni Colonna
Journal:  PLoS One       Date:  2011-02-02       Impact factor: 3.240

5.  CALCOM: a software for calculating the center of mass of proteins.

Authors:  Susan Costantini; Antonella Paladino; Angelo M Facchiano
Journal:  Bioinformation       Date:  2008-02-09

6.  Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50.

Authors:  Rajan Kumar Choudhary; Mohd Quadir Siddiqui; Pankaj S Thapa; Nikhil Gadewal; Senthil Kumar Nachimuthu; Ashok K Varma
Journal:  Sci Rep       Date:  2017-06-20       Impact factor: 4.379

7.  Atomistic mechanisms underlying the activation of the G protein-coupled sweet receptor heterodimer by sugar alcohol recognition.

Authors:  Panupong Mahalapbutr; Nitchakan Darai; Wanwisa Panman; Aunchan Opasmahakul; Nawee Kungwan; Supot Hannongbua; Thanyada Rungrotmongkol
Journal:  Sci Rep       Date:  2019-07-15       Impact factor: 4.379

8.  Human sirt-1: molecular modeling and structure-function relationships of an unordered protein.

Authors:  Ida Autiero; Susan Costantini; Giovanni Colonna
Journal:  PLoS One       Date:  2008-10-08       Impact factor: 3.240

9.  Uncommon functional properties of the first piscine 26S proteasome from the Antarctic notothenioid Trematomus bernacchii.

Authors:  Marta Gogliettino; Marco Balestrieri; Alessia Riccio; Angelo Facchiano; Carmela Fusco; Vincenzo Cecere Palazzo; Mosè Rossi; Ennio Cocca; Gianna Palmieri
Journal:  Biosci Rep       Date:  2016-04-15       Impact factor: 3.840

10.  The Chromosome-Level Genome of Miracle Fruit (Synsepalum dulcificum) Provides New Insights Into the Evolution and Function of Miraculin.

Authors:  Zhuang Yang; Zhenhuan Liu; Hang Xu; Yayu Chen; Pengmeng Du; Ping Li; Wenjie Lai; Haiyan Hu; Jie Luo; Yuanhao Ding
Journal:  Front Plant Sci       Date:  2022-01-03       Impact factor: 5.753

  10 in total

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