Literature DB >> 18158908

One-pot fluorescent labeling of xyloglucan oligosaccharides with sulforhodamine.

Ondrej Kosík1, Vladimír Farkas.   

Abstract

Xyloglucan oligosaccharides fluorescently labeled with sulforhodamine have proved to be a valuable tool in the assessment of transglycosylating activity of plant xyloglucan endotransglucosylase/hydrolase (XTH; EC 2.4.1.207). Here we describe a simple and fast procedure for their preparation. Accordingly, the starting xyloglucan-derived oligosaccharides are in the first step converted to their corresponding 1-amino-1-deoxyalditols (glycamines) by incubation with ammonium acetate and NaCNBH(3) at 80 degrees C for 2-4 h, and in the second step, the glycamines are reacted with Lissamine rhodamine B sulfonyl chloride to obtain fluorescently labeled derivatives of the oligosaccharide glycamines. All operations are carried out in a single centrifuge tube and the products from the individual reaction steps are isolated on the basis of their differential solubility in organic solvents. Using the described protocol, the whole procedure can be accomplished in less than 24 h. The sulforhodamine-labeled xyloglucan oligosaccharides thus obtained proved suitable as substrates for a sensitive fluorescence assay of the transglycosylating activity of XTH.

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Year:  2007        PMID: 18158908     DOI: 10.1016/j.ab.2007.11.025

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  5 in total

1.  Polysaccharide microarrays for high-throughput screening of transglycosylase activities in plant extracts.

Authors:  Ondrej Kosík; Richard P Auburn; Steven Russell; Eva Stratilová; Sona Garajová; Maria Hrmova; Vladimír Farkas
Journal:  Glycoconj J       Date:  2009-12-02       Impact factor: 2.916

2.  Assembly of the yeast cell wall. Crh1p and Crh2p act as transglycosylases in vivo and in vitro.

Authors:  Enrico Cabib; Vladimir Farkas; Ondrej Kosík; Noelia Blanco; Javier Arroyo; Peter McPhie
Journal:  J Biol Chem       Date:  2008-08-11       Impact factor: 5.157

3.  Engineering the acceptor substrate specificity in the xyloglucan endotransglycosylase TmXET6.3 from nasturtium seeds (Tropaeolum majus L.).

Authors:  Barbora Stratilová; Zuzana Firáková; Jaroslav Klaudiny; Sergej Šesták; Stanislav Kozmon; Dana Strouhalová; Soňa Garajová; Fairouz Ait-Mohand; Ágnes Horváthová; Vladimír Farkaš; Eva Stratilová; Maria Hrmova
Journal:  Plant Mol Biol       Date:  2019-03-13       Impact factor: 4.076

4.  Localisation and substrate specificities of transglycanases in charophyte algae relate to development and morphology.

Authors:  Klaus Herburger; Louise M Ryan; Zoë A Popper; Andreas Holzinger
Journal:  J Cell Sci       Date:  2018-01-29       Impact factor: 5.285

5.  Getting ready for host invasion: elevated expression and action of xyloglucan endotransglucosylases/hydrolases in developing haustoria of the holoparasitic angiosperm Cuscuta.

Authors:  Stian Olsen; Bernd Striberny; Julien Hollmann; Rainer Schwacke; Zoë Popper; Kirsten Krause
Journal:  J Exp Bot       Date:  2015-11-11       Impact factor: 6.992

  5 in total

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