Literature DB >> 18154307

Thermodynamic basis for the stabilities of three CutA1s from Pyrococcus horikoshii,Thermus thermophilus, and Oryza sativa, with unusually high denaturation temperatures.

Masahide Sawano1, Hitoshi Yamamoto, Kyoko Ogasahara, Shun-ichi Kidokoro, Shizue Katoh, Takayuki Ohnuma, Etsuko Katoh, Shigeyuki Yokoyama, Katsuhide Yutani.   

Abstract

In order to elucidate the stabilization mechanism of CutA1 from Pyrococcus horikoshii (PhCutA1) with a denaturation temperature of nearly 150 degrees C, GuHCl denaturation and heat denaturation were examined at neutral and acidic pHs. As a comparison, CutA1 proteins from Thermus thermophilus (TtCutA1) and Oryza sativa (OsCutA1) were also examined, which have lower optimum growth temperatures of 75 and 28 degrees C, respectively, than that (98 degrees C) of P. horikoshii. GuHCl-induced unfolding and refolding curves of the three proteins showed hysteresis effects due to an unusually slow unfolding rate. The midpoints of refolding for PhCutA1, TtCutA1 and OsCutA1 were 5.7 M, 3.3 M, and 2.3 M GuHCl, respectively, at pH 8.0 and 37 degrees C. DSC experiments with TtCutA1 and OsCutA1 showed that the denaturation temperatures were remarkably high, 112.8 and 97.3 degrees C, respectively, at pH 7.0 and that the good heat reversibility was amenable to thermodynamic analyses. At acidic pH, TtCutA1 showed higher stability to both heat and denaturant than PhCutA1. Combined with the data for DSC and denaturant denaturation, the unfolding Gibbs energy of PhCutA1 could be depicted as a function of temperature. It was experimentally revealed that (1) the unusually high stability of PhCutA1 basically originates from a common trimer structure of the three proteins, (2) the stability of PhCutA1 is superior to those of the other two CutA1s over all temperatures above 0 degrees C at neutral pH, due to the decrease in both enthalpy and entropy, and (3) ion pairs of PhCutA1 contribute to the unusually high stability at neutral pH.

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Year:  2007        PMID: 18154307     DOI: 10.1021/bi701761m

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  Increasing protein stability: importance of DeltaC(p) and the denatured state.

Authors:  Hailong Fu; Gerald Grimsley; J Martin Scholtz; C Nick Pace
Journal:  Protein Sci       Date:  2010-05       Impact factor: 6.725

Review 2.  Protein ionizable groups: pK values and their contribution to protein stability and solubility.

Authors:  C Nick Pace; Gerald R Grimsley; J Martin Scholtz
Journal:  J Biol Chem       Date:  2009-01-21       Impact factor: 5.157

3.  Synthesis of an intein-mediated artificial protein hydrogel.

Authors:  Miguel A Ramirez; Zhilei Chen
Journal:  J Vis Exp       Date:  2014-01-27       Impact factor: 1.355

4.  Increasing protein stability by improving beta-turns.

Authors:  Hailong Fu; Gerald R Grimsley; Abbas Razvi; J Martin Scholtz; C Nick Pace
Journal:  Proteins       Date:  2009-11-15

5.  The structures of the CutA1 proteins from Thermus thermophilus and Pyrococcus horikoshii: characterization of metal-binding sites and metal-induced assembly.

Authors:  Bagautdin Bagautdinov
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-03-25       Impact factor: 1.056

6.  Crystal structure of stable protein CutA1 from psychrotrophic bacterium Shewanella sp. SIB1.

Authors:  Aya Sato; Sonoko Yokotani; Takashi Tadokoro; Shun-ichi Tanaka; Clement Angkawidjaja; Yuichi Koga; Kazufumi Takano; Shigenori Kanaya
Journal:  J Synchrotron Radiat       Date:  2010-11-12       Impact factor: 2.616

7.  Protein thermodynamics can be predicted directly from biological growth rates.

Authors:  Ross Corkrey; Tom A McMeekin; John P Bowman; David A Ratkowsky; June Olley; Tom Ross
Journal:  PLoS One       Date:  2014-05-01       Impact factor: 3.240

8.  Complex kinetics and residual structure in the thermal unfolding of yeast triosephosphate isomerase.

Authors:  Ariana Labastida-Polito; Georgina Garza-Ramos; Menandro Camarillo-Cadena; Rafael A Zubillaga; Andrés Hernández-Arana
Journal:  BMC Biochem       Date:  2015-09-03       Impact factor: 4.059

9.  Thermodynamics of protein denaturation at temperatures over 100 °C: CutA1 mutant proteins substituted with hydrophobic and charged residues.

Authors:  Yoshinori Matsuura; Michiyo Takehira; Yasumasa Joti; Kyoko Ogasahara; Tomoyuki Tanaka; Naoko Ono; Naoki Kunishima; Katsuhide Yutani
Journal:  Sci Rep       Date:  2015-10-26       Impact factor: 4.379

10.  Ion-ion interactions in the denatured state contribute to the stabilization of CutA1 proteins.

Authors:  Katsuhide Yutani; Yoshinori Matsuura; Hisashi Naitow; Yasumasa Joti
Journal:  Sci Rep       Date:  2018-05-16       Impact factor: 4.379

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