Literature DB >> 18093992

A new expression system for protein crystallization using trimeric coiled-coil adaptors.

Birte Hernandez Alvarez1, Marcus D Hartmann, Reinhard Albrecht, Andrei N Lupas, Kornelius Zeth, Dirk Linke.   

Abstract

We repeatedly experienced difficulties in obtaining pure protein of a defined oligomeric state when expressing domains that consist partially or entirely of coiled coils. We therefore modified an established expression vector, pASK-IBA, to generate N- and C-terminal fusions of the cloned domain in heptad register with the GCN4 leucine zipper. GCN4 is a well-characterized coiled coil, for which stable dimeric, trimeric and tetrameric forms exist. To test this expression system, we produced a series of constructs derived from the trimeric autotransporter adhesin STM3691 of Salmonella (SadA), which has a highly repetitive structure punctuated by coiled-coil regions. The constructs begin and end with predicted coiled-coil segments of SadA, each fused in the correct heptad register to the trimeric form of GCN4, GCN4pII. All constructs were expressed at high levels, trimerized either natively or after refolding from inclusion bodies, and yielded crystals that diffracted to high resolution. Thus, fusion to GCN4pII allows for the efficient expression and crystallization of proteins containing trimeric coiled coils. The structure of short constructs can be solved conveniently by molecular replacement using the known GCN4 structure as a search model. The system can be adapted for constructs with dimeric or tetrameric coiled coils, using the corresponding GCN4 variants.

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Year:  2007        PMID: 18093992     DOI: 10.1093/protein/gzm071

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  18 in total

1.  Combining Wet and Dry Lab Techniques to Guide the Crystallization of Large Coiled-coil Containing Proteins.

Authors:  Jenna K Zalewski; Simone Heber; Joshua H Mo; Keith O'Conor; Jeffrey D Hildebrand; Andrew P VanDemark
Journal:  J Vis Exp       Date:  2017-01-06       Impact factor: 1.355

2.  Induction of protective immunity against influenza A/Jiangxi-Donghu/346/2013 (H10N8) in mice.

Authors:  Li-Fang Kuah; Lay-Hoon Tang; Troy Sutton; Jie-Hui Lim; Wan-Ling Sin; Elaine Lamirande; Kanta Subbarao; Yuk-Fai Lau
Journal:  J Gen Virol       Date:  2017-03-13       Impact factor: 3.891

3.  Structural Basis for Toughness and Flexibility in the C-terminal Passenger Domain of an Acinetobacter Trimeric Autotransporter Adhesin.

Authors:  Kotaro Koiwai; Marcus D Hartmann; Dirk Linke; Andrei N Lupas; Katsutoshi Hori
Journal:  J Biol Chem       Date:  2015-12-23       Impact factor: 5.157

4.  Complete fiber structures of complex trimeric autotransporter adhesins conserved in enterobacteria.

Authors:  Marcus D Hartmann; Iwan Grin; Stanislaw Dunin-Horkawicz; Silvia Deiss; Dirk Linke; Andrei N Lupas; Birte Hernandez Alvarez
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-03       Impact factor: 11.205

5.  A coiled-coil motif that sequesters ions to the hydrophobic core.

Authors:  Marcus D Hartmann; Oswin Ridderbusch; Kornelius Zeth; Reinhard Albrecht; Oli Testa; Derek N Woolfson; Guido Sauer; Stanislaw Dunin-Horkawicz; Andrei N Lupas; Birte Hernandez Alvarez
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-23       Impact factor: 11.205

6.  SadA, a trimeric autotransporter from Salmonella enterica serovar Typhimurium, can promote biofilm formation and provides limited protection against infection.

Authors:  Dhaarini Raghunathan; Timothy J Wells; Faye C Morris; Robert K Shaw; Saeeda Bobat; Sarah E Peters; Gavin K Paterson; Karina Tveen Jensen; Denisse L Leyton; Jessica M A Blair; Douglas F Browning; John Pravin; Adriana Flores-Langarica; Jessica R Hitchcock; Claudia T P Moraes; Roxane M F Piazza; Duncan J Maskell; Mark A Webber; Robin C May; Calman A MacLennan; Laura J Piddock; Adam F Cunningham; Ian R Henderson
Journal:  Infect Immun       Date:  2011-08-22       Impact factor: 3.441

7.  Recombinant trimeric HA protein immunogenicity of H5N1 avian influenza viruses and their combined use with inactivated or adenovirus vaccines.

Authors:  Shih-Chang Lin; Ming-Hsi Huang; Pei-Chun Tsou; Li-Min Huang; Pele Chong; Suh-Chin Wu
Journal:  PLoS One       Date:  2011-05-31       Impact factor: 3.240

Review 8.  Type V secretion: mechanism(s) of autotransport through the bacterial outer membrane.

Authors:  Jack C Leo; Iwan Grin; Dirk Linke
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-04-19       Impact factor: 6.237

9.  Structure of the head of the Bartonella adhesin BadA.

Authors:  Pawel Szczesny; Dirk Linke; Astrid Ursinus; Kerstin Bär; Heinz Schwarz; Tanja M Riess; Volkhard A J Kempf; Andrei N Lupas; Jörg Martin; Kornelius Zeth
Journal:  PLoS Pathog       Date:  2008-08-08       Impact factor: 6.823

10.  A trimeric lipoprotein assists in trimeric autotransporter biogenesis in enterobacteria.

Authors:  Iwan Grin; Marcus D Hartmann; Guido Sauer; Birte Hernandez Alvarez; Monika Schütz; Samuel Wagner; Johannes Madlung; Boris Macek; Alfonso Felipe-Lopez; Michael Hensel; Andrei Lupas; Dirk Linke
Journal:  J Biol Chem       Date:  2013-12-25       Impact factor: 5.157

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