Literature DB >> 18084631

Comparative analysis of Drosophila melanogaster and Caenorhabditis elegans gene expression experiments in the European Soyuz flights to the International Space Station.

L J Leandro1, N J Szewczyk, A Benguría, R Herranz, D Laván, F J Medina, G Gasset, J van Loon, C A Conley, R Marco.   

Abstract

The European Soyuz missions have been one of the main routes for conducting scientific experiments onboard the International Space Station, which is currently in the construction phase. A relatively large number of life and physical sciences experiments as well as technology demonstrations have been carried out during these missions. Included among these experiments are the Gene experiment during the Spanish "Cervantes" Soyuz mission and the ICE-1st experiment during the Dutch "Delta" mission. In both experiments, full genome microarray analyses were carried out on RNA extracted from whole animals recovered from the flight. These experiments indicated relatively large scale changes in gene expression levels in response to spaceflight for two popular model systems, Drosophila melanogaster (Gene) and Caenorabditis elegans (ICE-1st). Here we report a comparative analysis of results from these two experiments. Finding orthologous genes between the fruit fly and the nematode was far from straightforward, reducing the number of genes that we could compare to roughly 20% of the full comparative genome. Within this sub-set of the data (2286 genes), only six genes were found to display identical changes between species (decreased) while 1809 genes displayed no change in either species. Future experiments using ground simulation techniques will allow producing a better, more comprehensive picture of the putative set of genes affected in multicellular organisms by changes in gravity and getting a deeper understanding of how animals respond and adapt to spaceflight.

Entities:  

Year:  2007        PMID: 18084631      PMCID: PMC2140006          DOI: 10.1016/j.asr.2007.05.070

Source DB:  PubMed          Journal:  Adv Space Res        ISSN: 0273-1177            Impact factor:   2.152


  7 in total

1.  Description of International Caenorhabditis elegans Experiment first flight (ICE-FIRST).

Authors:  N J Szewczyk; J Tillman; C A Conley; L Granger; L Segalat; A Higashitani; S Honda; Y Honda; H Kagawa; R Adachi; A Higashibata; N Fujimoto; K Kuriyama; N Ishioka; K Fukui; D Baillie; A Rose; G Gasset; B Eche; D Chaput; M Viso
Journal:  Adv Space Res       Date:  2008-09-15       Impact factor: 2.152

2.  Checkpoint and physiological apoptosis in germ cells proceeds normally in spaceflown Caenorhabditis elegans.

Authors:  A Higashitani; A Higashibata; Y Sasagawa; T Sugimoto; Y Miyazawa; N J Szewcyk; M Viso; G Gasset; B Eche; K Fukui; T Shimazu; N Fujimoto; K Kuriyama; N Ishioka
Journal:  Apoptosis       Date:  2005-10       Impact factor: 4.677

3.  Decreased expression of myogenic transcription factors and myosin heavy chains in Caenorhabditis elegans muscles developed during spaceflight.

Authors:  Akira Higashibata; Nathaniel J Szewczyk; Catharine A Conley; Mari Imamizo-Sato; Atsushi Higashitani; Noriaki Ishioka
Journal:  J Exp Biol       Date:  2006-08       Impact factor: 3.312

4.  A mutational analysis of Caenorhabditis elegans in space.

Authors:  Yang Zhao; Kenneth Lai; Iris Cheung; Jillian Youds; Maja Tarailo; Sanja Tarailo; Ann Rose
Journal:  Mutat Res       Date:  2006-10-10       Impact factor: 2.433

5.  Preservation of viable biological samples for experiments in space laboratories.

Authors:  P Anthony; J Ausseil; B Bechler; A Benguría; N Blackhall; L G Briarty; A Cogoli; M R Davey; R Garesse; R Hager; R Loddenkemper; R Marchant; R Marco; H J Marthy; M Perry; J B Power; P Schiller; C Ugalde; D Volkmann; J Wardrop
Journal:  J Biotechnol       Date:  1996-06-27       Impact factor: 3.307

Review 6.  Drosophila melanogaster and the future of 'evo-devo' biology in space. Challenges and problems in the path of an eventual colonization project outside the earth.

Authors:  Roberto Marco; David Husson; Raul Herranz; Jesús Mateos; F Javier Medina
Journal:  Adv Space Biol Med       Date:  2003

7.  Gravitaxis in Drosophila melanogaster: a forward genetic screen.

Authors:  J D Armstrong; M J Texada; R Munjaal; D A Baker; K M Beckingham
Journal:  Genes Brain Behav       Date:  2006-04       Impact factor: 3.449

  7 in total
  9 in total

1.  Description of International Caenorhabditis elegans Experiment first flight (ICE-FIRST).

Authors:  N J Szewczyk; J Tillman; C A Conley; L Granger; L Segalat; A Higashitani; S Honda; Y Honda; H Kagawa; R Adachi; A Higashibata; N Fujimoto; K Kuriyama; N Ishioka; K Fukui; D Baillie; A Rose; G Gasset; B Eche; D Chaput; M Viso
Journal:  Adv Space Res       Date:  2008-09-15       Impact factor: 2.152

2.  Spaceflight transcriptomes: unique responses to a novel environment.

Authors:  Anna-Lisa Paul; Agata K Zupanska; Dejerianne T Ostrow; Yanping Zhang; Yijun Sun; Jian-Liang Li; Savita Shanker; William G Farmerie; Claire E Amalfitano; Robert J Ferl
Journal:  Astrobiology       Date:  2012-01-05       Impact factor: 4.335

3.  Evaluation of the Fluids Mixing Enclosure System for Life Science Experiments During a Commercial Caenorhabditis elegans Spaceflight Experiment.

Authors:  Paul Warren; Andy Golden; John Hanover; Dona Love; Freya Shephard; Nathaniel J Szewczyk
Journal:  Adv Space Res       Date:  2013-06-01       Impact factor: 2.152

4.  Review of the results from the International C. elegans first experiment (ICE-FIRST).

Authors:  A A Adenle; B Johnsen; N J Szewczyk
Journal:  Adv Space Res       Date:  2009-07-15       Impact factor: 2.152

Review 5.  The gymnastics of epigenomics in rice.

Authors:  Aditya Banerjee; Aryadeep Roychoudhury
Journal:  Plant Cell Rep       Date:  2017-09-02       Impact factor: 4.570

6.  Genomic response of the nematode Caenorhabditis elegans to spaceflight.

Authors:  Florian Selch; Akira Higashibata; Mari Imamizo-Sato; Atsushi Higashitani; Noriaki Ishioka; Nathaniel J Szewczyk; Catharine A Conley
Journal:  Adv Space Res       Date:  2008       Impact factor: 2.152

7.  Remote automated multi-generational growth and observation of an animal in low Earth orbit.

Authors:  Elizabeth A Oczypok; Timothy Etheridge; Jacob Freeman; Louis Stodieck; Robert Johnsen; David Baillie; Nathaniel J Szewczyk
Journal:  J R Soc Interface       Date:  2011-11-30       Impact factor: 4.118

8.  Effect of spaceflight on the circadian rhythm, lifespan and gene expression of Drosophila melanogaster.

Authors:  Lingling Ma; Jun Ma; Kanyan Xu
Journal:  PLoS One       Date:  2015-03-23       Impact factor: 3.240

Review 9.  Space omics research in Europe: Contributions, geographical distribution and ESA member state funding schemes.

Authors:  Colleen S Deane; Willian A da Silveira; Raúl Herranz
Journal:  iScience       Date:  2022-02-15
  9 in total

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