Literature DB >> 18084078

The structure of allophycocyanin from Thermosynechococcus elongatus at 3.5 A resolution.

James William Murray1, Karim Maghlaoui, James Barber.   

Abstract

Cyanobacteria and red algae use light-harvesting pigments bound by proteins to capture solar radiation and to channel excitation energy into their reaction centres. In most cyanobacteria, a multi-megadalton soluble structure known as the phycobilisome is a major light-harvesting system. Allophycocyanin is the main component of the phycobilisome core, forming a link between the rest of the phycobilisome and the reaction-centre core. The crystal structure of allophycocyanin from Thermosynechococcus elongatus (TeAPC) has been determined and refined at 3.5 A resolution to a crystallographic R value of 26.0% (R(free) = 28.5%). The structure was solved by molecular replacement using the allophycocyanin structure from Spirulina platensis as the search model. The asymmetric unit contains an (alphabeta) monomer which is expanded by symmetry to a crystallographic trimer.

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Year:  2007        PMID: 18084078      PMCID: PMC2344114          DOI: 10.1107/S1744309107050920

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  28 in total

1.  Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.

Authors:  P Jordan; P Fromme; H T Witt; O Klukas; W Saenger; N Krauss
Journal:  Nature       Date:  2001-06-21       Impact factor: 49.962

2.  Crystal structure of allophycocyanin from red algae Porphyra yezoensis at 2.2-A resolution.

Authors:  J Y Liu; T Jiang; J P Zhang; D C Liang
Journal:  J Biol Chem       Date:  1999-06-11       Impact factor: 5.157

3.  The 1.45 A three-dimensional structure of C-phycocyanin from the thermophilic cyanobacterium Synechococcus elongatus.

Authors:  Jon Nield; Pierre J Rizkallah; James Barber; Naomi E Chayen
Journal:  J Struct Biol       Date:  2003-02       Impact factor: 2.867

4.  Structure of the cytochrome b6f complex of oxygenic photosynthesis: tuning the cavity.

Authors:  Genji Kurisu; Huamin Zhang; Janet L Smith; William A Cramer
Journal:  Science       Date:  2003-10-02       Impact factor: 47.728

5.  Structure validation by Calpha geometry: phi,psi and Cbeta deviation.

Authors:  Simon C Lovell; Ian W Davis; W Bryan Arendall; Paul I W de Bakker; J Michael Word; Michael G Prisant; Jane S Richardson; David C Richardson
Journal:  Proteins       Date:  2003-02-15

Review 6.  Elucidation of the molecular structures of components of the phycobilisome: reconstructing a giant.

Authors:  Noam Adir
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

7.  gamma-N-methylasparagine in phycobiliproteins. Occurrence, location, and biosynthesis.

Authors:  A V Klotz; A N Glazer
Journal:  J Biol Chem       Date:  1987-12-25       Impact factor: 5.157

8.  Isolation, crystallization, crystal structure analysis and refinement of allophycocyanin from the cyanobacterium Spirulina platensis at 2.3 A resolution.

Authors:  K Brejc; R Ficner; R Huber; S Steinbacher
Journal:  J Mol Biol       Date:  1995-06-02       Impact factor: 5.469

9.  The presence of multidomain linkers determines the bundle-shape structure of the phycobilisome of the cyanobacterium Gloeobacter violaceus PCC 7421.

Authors:  David W Krogmann; Bertha Pérez-Gómez; Emma Berta Gutiérrez-Cirlos; Alicia Chagolla-López; Luis González de la Vara; Carlos Gómez-Lojero
Journal:  Photosynth Res       Date:  2007-02-20       Impact factor: 3.429

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  11 in total

1.  Structural organization of an intact phycobilisome and its association with photosystem II.

Authors:  Leifu Chang; Xianwei Liu; Yanbing Li; Cui-Cui Liu; Fan Yang; Jindong Zhao; Sen-Fang Sui
Journal:  Cell Res       Date:  2015-05-22       Impact factor: 25.617

2.  Coupled rows of PBS cores and PSII dimers in cyanobacteria: symmetry and structure.

Authors:  Dmitry V Zlenko; Tatiana V Galochkina; Pavel M Krasilnikov; Igor N Stadnichuk
Journal:  Photosynth Res       Date:  2017-04-01       Impact factor: 3.573

3.  Structural modeling of the phycobilisome core and its association with the photosystems.

Authors:  D V Zlenko; Pavel M Krasilnikov; Igor N Stadnichuk
Journal:  Photosynth Res       Date:  2016-04-27       Impact factor: 3.573

Review 4.  Structural, functional and auxiliary proteins of photosystem II.

Authors:  Cristina Pagliano; Guido Saracco; James Barber
Journal:  Photosynth Res       Date:  2013-02-17       Impact factor: 3.573

5.  Biosynthesis of fluorescent cyanobacterial allophycocyanin trimer in Escherichia coli.

Authors:  Shaofang Liu; Yingjie Chen; Yandu Lu; Huaxin Chen; Fuchao Li; Song Qin
Journal:  Photosynth Res       Date:  2010-07-06       Impact factor: 3.573

Review 6.  Exploring the structural aspects and therapeutic perspectives of cyanobacterial phycobiliproteins.

Authors:  Stuti N Patel; Ravi R Sonani; Diya Roy; Niraj Kumar Singh; Sanjukta Subudhi; Sunil Pabbi; Datta Madamwar
Journal:  3 Biotech       Date:  2022-08-13       Impact factor: 2.893

7.  Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride.

Authors:  Albert Guskov; Jan Kern; Azat Gabdulkhakov; Matthias Broser; Athina Zouni; Wolfram Saenger
Journal:  Nat Struct Mol Biol       Date:  2009-02-15       Impact factor: 15.369

8.  Crystal Structure of Allophycocyanin from Marine Cyanobacterium Phormidium sp. A09DM.

Authors:  Ravi Raghav Sonani; Gagan Deep Gupta; Datta Madamwar; Vinay Kumar
Journal:  PLoS One       Date:  2015-04-29       Impact factor: 3.240

9.  Structure of the dual-function fructose-1,6/sedoheptulose-1,7-bisphosphatase from Thermosynechococcus elongatus bound with sedoheptulose-7-phosphate.

Authors:  Charles A R Cotton; Burak V Kabasakal; Nishat A Miah; James W Murray
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-09-23       Impact factor: 1.056

10.  Biosynthesis and characterization of a recombinant eukaryotic allophycocyanin using prokaryotic accessory enzymes.

Authors:  Jorge Dagnino-Leone; Maximiliano Figueroa; Elena Uribe; María Victoria Hinrichs; Diego Ortiz-López; José Martínez-Oyanedel; Marta Bunster
Journal:  Microbiologyopen       Date:  2020-01-22       Impact factor: 3.139

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