Literature DB >> 18079704

Measurement of very low rates of cell proliferation by heavy water labeling of DNA and gas chromatography/pyrolysis/isotope ratio-mass spectrometric analysis.

Jason N Voogt1, Mohamad Awada, Elizabeth J Murphy, Gregory M Hayes, Robert Busch, Marc K Hellerstein.   

Abstract

DNA replication during S-phase represents a biochemical metric of cell division. We present here a protocol for measuring very low rates of cell proliferation, on the basis of the incorporation of deuterium ((2)H) from heavy water ((2)H(2)O) into the deoxyribose moiety of purine deoxyribonucleotides in DNA of dividing cells, by use of gas chromatography/pyrolysis/isotope ratio-mass spectrometry (GC/P/IRMS). Very low levels of label incorporation (>or=0.002% atom percent excess (2)H) can be quantified by GC/P/IRMS. This protocol thereby permits shorter periods or lower amounts of (2)H(2)O administration than would be required using standard GC/MS techniques for measuring cell proliferation kinetics (see accompanying protocol in this issue). A disadvantage of this approach compared to GC/MS is the requirement for larger numbers of cells (> approximately 10(7)). This protocol enables definitive in vivo studies of the fraction or absolute number of newly divided cells and their subsequent survival kinetics in animals and humans, even when turnover rates are very low. Indolent hematologic malignancies, such as chronic lymphocytic leukemia, and other relatively quiescent cells represent promising areas of application.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 18079704     DOI: 10.1038/nprot.2007.421

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  15 in total

1.  Modelling deuterium labelling of lymphocytes with temporal and/or kinetic heterogeneity.

Authors:  Rob J De Boer; Alan S Perelson; Ruy M Ribeiro
Journal:  J R Soc Interface       Date:  2012-04-18       Impact factor: 4.118

2.  Sensitive GC-MS/MS method to measure deuterium labeled deoxyadenosine in DNA from limited mouse cell populations.

Authors:  Don E Farthing; Nataliya P Buxbaum; Catherine V Bare; Shirin M Treadwell; Veena Kapoor; Kirsten M Williams; Ronald E Gress
Journal:  Anal Chem       Date:  2013-04-10       Impact factor: 6.986

Review 3.  Stable isotope tracers and exercise physiology: past, present and future.

Authors:  Daniel J Wilkinson; Matthew S Brook; Kenneth Smith; Philip J Atherton
Journal:  J Physiol       Date:  2016-10-09       Impact factor: 5.182

4.  Leukemia cell proliferation and death in chronic lymphocytic leukemia patients on therapy with the BTK inhibitor ibrutinib.

Authors:  Jan A Burger; Kelvin W Li; Michael J Keating; Mariela Sivina; Ahmed M Amer; Naveen Garg; Alessandra Ferrajoli; Xuelin Huang; Hagop Kantarjian; William G Wierda; Susan O'Brien; Marc K Hellerstein; Scott M Turner; Claire L Emson; Shih-Shih Chen; Xiao-Jie Yan; Dominik Wodarz; Nicholas Chiorazzi
Journal:  JCI Insight       Date:  2017-01-26

Review 5.  Tracing metabolic flux in vivo: basic model structures of tracer methodology.

Authors:  Il-Young Kim; Sanghee Park; Yeongmin Kim; Hee-Joo Kim; Robert R Wolfe
Journal:  Exp Mol Med       Date:  2022-09-08       Impact factor: 12.153

6.  The application of 2H2O to measure skeletal muscle protein synthesis.

Authors:  Heath G Gasier; James D Fluckey; Stephen F Previs
Journal:  Nutr Metab (Lond)       Date:  2010-04-21       Impact factor: 4.169

7.  Quantifying T lymphocyte turnover.

Authors:  Rob J De Boer; Alan S Perelson
Journal:  J Theor Biol       Date:  2013-01-09       Impact factor: 2.691

8.  Isolation of malignant B cells from patients with chronic lymphocytic leukemia (CLL) for analysis of cell proliferation: validation of a simplified method suitable for multi-center clinical studies.

Authors:  Gregory M Hayes; Robert Busch; Jason Voogt; Iche M Siah; Tracy A Gee; Marc K Hellerstein; Nicholas Chiorazzi; Kanti R Rai; Elizabeth J Murphy
Journal:  Leuk Res       Date:  2009-10-24       Impact factor: 3.156

9.  Applications of metabolomics and proteomics to the mdx mouse model of Duchenne muscular dystrophy: lessons from downstream of the transcriptome.

Authors:  Julian L Griffin; Christine Des Rosiers
Journal:  Genome Med       Date:  2009-03-25       Impact factor: 11.117

10.  Induction of a stringent metabolic response in intracellular stages of Leishmania mexicana leads to increased dependence on mitochondrial metabolism.

Authors:  Eleanor C Saunders; William W Ng; Joachim Kloehn; Jennifer M Chambers; Milica Ng; Malcolm J McConville
Journal:  PLoS Pathog       Date:  2014-01-23       Impact factor: 6.823

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.