Literature DB >> 18070592

New evidence for cofactor's amino group function in thiamin catalysis by transketolase.

Ludmilla E Meshalkina1, German A Kochetov, Johanna Brauer, Gerhard Hübner, Kai Tittmann, Ralph Golbik.   

Abstract

Transketolase from Saccharomyces cerevisiae exhibits a rarely reported activity with a methylated analogue of the native cofactor, 4'-methylamino-thiamin diphosphate. We demonstrated the kinetic stability of the dihydroxyethyl carbanion/enamine intermediate to be dependent on the functionality of the 4'-aminopyrimidine moiety of thiamin diphosphate [R. Golbik, L.E. Meshalkina, T. Sandalova, K. Tittmann, E. Fiedler, H. Neef, S. König, R. Kluger, G.A. Kochetov, G. Schneider, G. Hübner, Effect of coenzyme modification on the structural and catalytic properties of wild-type transketolase and of the variant E418A from Saccharomyces cerevisae, FEBS J. (2005) 272 1326-1342]. This paper extends these investigations of the function of the coenzyme's aminopyrimidine in transketolase catalysis exemplified for the 4'-monomethylamino-thiamin diphosphate analogue. Here, we report near UV circular dichroism data and NMR-based analysis of reaction intermediates that give evidence for a strong destabilisation of the carbanion/enamine of DHE-4'-monomethylamino-thiamin diphosphate on the enzyme. A new negative band in near UV circular dichroism arising during turnover is attributed to the conjugate acid of the carbanion/enamine intermediate, an assignment additionally corroborated by (1)H NMR-based intermediate analysis. As opposed to the kinetically stabilized carbanion/enamine intermediate in transketolase when reconstituted with the native cofactor, DHE-4'-monomethylamino-thiamin diphosphate is rapidly released from the active centers during turnover and accumulates in the medium on a preparative scale.

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Year:  2007        PMID: 18070592     DOI: 10.1016/j.bbrc.2007.11.180

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  2 in total

1.  Solid-state NMR and density functional theory studies of ionization states of thiamin.

Authors:  Sivakumar Paramasivam; Anand Balakrishnan; Olga Dmitrenko; Amy Godert; Tadhg P Begley; Frank Jordan; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2010-12-22       Impact factor: 2.991

2.  Snapshot of a reaction intermediate: analysis of benzoylformate decarboxylase in complex with a benzoylphosphonate inhibitor.

Authors:  Gabriel S Brandt; Malea M Kneen; Sumit Chakraborty; Ahmet T Baykal; Natalia Nemeria; Alejandra Yep; David I Ruby; Gregory A Petsko; George L Kenyon; Michael J McLeish; Frank Jordan; Dagmar Ringe
Journal:  Biochemistry       Date:  2009-04-21       Impact factor: 3.162

  2 in total

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