Literature DB >> 18069809

Waiting cycle times and generalized Haldane equality in the steady-state cycle kinetics of single enzymes.

Hao Ge1.   

Abstract

Enzyme kinetics are cyclic. A more realistic reversible three-step mechanism of the Michaelis-Menten kinetics is investigated in detail, and three kinds of waiting cycle times T, T+, T- are defined. It is shown that the mean waiting cycle times T, T+, and T- are the reciprocal of the steady-state cycle flux Jss, the forward steady-state cycle flux Jss+ and the backward steady-state cycle flux Jss, respectively. We also show that the distribution of T+ conditioned on T+<T- is identical to the distribution of T- conditioned on T-< T+, which is referred to as the generalized Haldane equality. Consequently, the mean waiting cycle time of T+ conditioned on T+<T- (T+|T+<T-) and the one of T- conditioned on T-<T+ (T-|T-<T+) are both just the same as T. In addition, the forward and backward stepping probabilities p+ and p- are also defined and discussed, especially their relationship with the cycle fluxes and waiting cycle times. Furthermore, we extend the same results to the n-step cycle, and finally, experimental and theoretically based evidence are also included.

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Year:  2007        PMID: 18069809     DOI: 10.1021/jp0729967

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  2 in total

1.  Cooperativity and specificity in enzyme kinetics: a single-molecule time-based perspective.

Authors:  Hong Qian
Journal:  Biophys J       Date:  2008-04-25       Impact factor: 4.033

2.  Extensions to Michaelis-Menten Kinetics for Single Parameters.

Authors:  R T K Ariyawansha; B F A Basnayake; A K Karunarathna; M I M Mowjood
Journal:  Sci Rep       Date:  2018-11-08       Impact factor: 4.379

  2 in total

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