Literature DB >> 18068679

Molecular mimicry: structural camouflage of proteins and nucleic acids.

Panagiotis A Tsonis1, Bhakti Dwivedi.   

Abstract

When it comes to protein specificity and function their three-dimensional structure is the ultimate determinant. Thus, sequences that participate in key parts, such as catalytic sites or DNA binding have been favored and maintained highly conserved during evolution. However, in a reversal of fortune, selection has favored conservation of shapes over sequence, especially when proteins look like nucleic acids. Proteins from pathogens evade the host's defenses because they are shaped as DNA; others use such a disguise for transcriptional regulation. Several factors are tRNA look-alikes so that they can efficiently control the process of protein synthesis. Molecular mimicry among RNAs could result in a new unexplored level in gene regulation. This comprehensive review outlines this important area and aims to emphasize that molecular mimicry could in fact be more widespread than initially thought and eventually adds a new layer of genetic regulation.

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Year:  2007        PMID: 18068679     DOI: 10.1016/j.bbamcr.2007.11.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

1.  Origin of biomolecular games: deception and molecular evolution.

Authors:  Steven E Massey; Bud Mishra
Journal:  J R Soc Interface       Date:  2018-09       Impact factor: 4.118

2.  Comparison and functional implications of the 3D architectures of viral tRNA-like structures.

Authors:  John A Hammond; Robert P Rambo; Megan E Filbin; Jeffrey S Kieft
Journal:  RNA       Date:  2009-02       Impact factor: 4.942

3.  De novo design of protein mimics of B-DNA.

Authors:  Deniz Yüksel; Piero R Bianco; Krishna Kumar
Journal:  Mol Biosyst       Date:  2016-01

4.  INI1/SMARCB1 Rpt1 domain mimics TAR RNA in binding to integrase to facilitate HIV-1 replication.

Authors:  Updesh Dixit; Savita Bhutoria; Xuhong Wu; Liming Qiu; Menachem Spira; Sheeba Mathew; Richard Harris; Lucas J Adams; Sean Cahill; Rajiv Pathak; P Rajesh Kumar; Minh Nguyen; Seetharama A Acharya; Michael Brenowitz; Steven C Almo; Xiaoqin Zou; Alasdair C Steven; David Cowburn; Mark Girvin; Ganjam V Kalpana
Journal:  Nat Commun       Date:  2021-05-12       Impact factor: 14.919

5.  Identification of candidate mimicry proteins involved in parasite-driven phenotypic changes.

Authors:  Francois Olivier Hebert; Luke Phelps; Irene Samonte; Mahesh Panchal; Stephan Grambauer; Iain Barber; Martin Kalbe; Christian R Landry; Nadia Aubin-Horth
Journal:  Parasit Vectors       Date:  2015-04-15       Impact factor: 3.876

6.  Molecular evolution of protein-RNA mimicry as a mechanism for translational control.

Authors:  Assaf Katz; Lindsey Solden; S Betty Zou; William Wiley Navarre; Michael Ibba
Journal:  Nucleic Acids Res       Date:  2013-12-13       Impact factor: 16.971

7.  Finding optimal interaction interface alignments between biological complexes.

Authors:  Xuefeng Cui; Hammad Naveed; Xin Gao
Journal:  Bioinformatics       Date:  2015-06-15       Impact factor: 6.937

8.  Molecular crypsis by pathogenic fungi using human factor H. A numerical model.

Authors:  Stefan N Lang; Sebastian Germerodt; Christina Glock; Christine Skerka; Peter F Zipfel; Stefan Schuster
Journal:  PLoS One       Date:  2019-02-19       Impact factor: 3.240

Review 9.  Mechanistic and Structural Studies of Protein-Only RNase P Compared to Ribonucleoproteins Reveal the Two Faces of the Same Enzymatic Activity.

Authors:  Cédric Schelcher; Claude Sauter; Philippe Giegé
Journal:  Biomolecules       Date:  2016-06-24
  9 in total

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