Literature DB >> 18066670

The karyotype and 5S rRNA genes from Spanish individuals of the bat species Rhinolophus hipposideros (Rhinolophidae; Chiroptera).

Eva Puerma1, Manuel J Acosta, Maria José L Barragán, Sergio Martínez, Juan Alberto Marchal, Mónica Bullejos, Antonio Sánchez.   

Abstract

The karyotype of individuals of the species Rhinolophus hipposideros from Spain present a chromosome number of 2n = 54 (NFa = 62). The described karyotype for these specimens is very similar to another previously described in individual from Bulgaria. However, the presence of one additional pair of autosomal acrocentric chromosomes in the Bulgarian karyotype and the differences in X chromosome morphology indicated that we have described a new karyotype variant in this species. In addition, we have analyzed several clones of 1.4 and 1 kb of a PstI repeated DNA sequence from the genome of R. hipposideros. The repeated sequence included a region with high identity with the 5S rDNA genes and flanking regions, with no homology with GenBank sequences. Search for polymerase III regulatory elements demonstrated the presence of type I promoter elements (A-box, Intermediate Element and C-box) in the 5S rDNA region. In addition, upstream regulatory elements, as a D-box and Sp1 binding sequences, were present in flanking regions. All data indicated that the cloned repeated sequences are the functional rDNA genes from this species. Finally, FISH demonstrated the presence of rDNA in nine chromosome pairs, which is surprising as most mammals have only one carrier chromosome pair.

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Year:  2007        PMID: 18066670     DOI: 10.1007/s10709-007-9236-4

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  39 in total

Review 1.  Survey and summary: transcription by RNA polymerases I and III.

Authors:  M R Paule; R J White
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

2.  Effect of mutations in the upstream promoter on the transcription of human 5S rRNA genes.

Authors:  C Hallenberg; S Frederiksen
Journal:  Biochim Biophys Acta       Date:  2001-08-30

3.  Nucleotide sequence of a mouse 5S rRNA variant gene.

Authors:  R Leah; S Frederiksen; J Engberg; P D Sørensen
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

4.  Characterization of human 5S rRNA genes.

Authors:  P D Sørensen; S Frederiksen
Journal:  Nucleic Acids Res       Date:  1991-08-11       Impact factor: 16.971

5.  Mink 5S rRNA genes map to 2q in three loci suggesting conservation of synteny with human 1q.

Authors:  K Christensen; B Lomholt; C Hallenberg; K V Nielsen
Journal:  Hereditas       Date:  1998       Impact factor: 3.271

6.  The concerted evolution of 5S ribosomal genes linked to the repeat units of other multigene families.

Authors:  G Drouin; M M de Sá
Journal:  Mol Biol Evol       Date:  1995-05       Impact factor: 16.240

7.  Dynamics of 5S rDNA in the tilapia (Oreochromis niloticus) genome: repeat units, inverted sequences, pseudogenes and chromosome loci.

Authors:  C Martins; A P Wasko; C Oliveira; F Porto-Foresti; P P Parise-Maltempi; J M Wright; F Foresti
Journal:  Cytogenet Genome Res       Date:  2002       Impact factor: 1.636

8.  Guinea pig (Cavio cambayo) 5S rRNA genes map to 7q2, 20q2 and 30q2 shown by an R-banded karyotype with PNA-FISH.

Authors:  Bodil Lomholt; Knud Christensen; Sune Frederiksen
Journal:  Hereditas       Date:  2002       Impact factor: 3.271

9.  Sequences and evolutionary analysis of mouse 5S rDNAs.

Authors:  H Suzuki; K Moriwaki; S Sakurai
Journal:  Mol Biol Evol       Date:  1994-07       Impact factor: 16.240

10.  Retroposed elements as archives for the evolutionary history of placental mammals.

Authors:  Jan Ole Kriegs; Gennady Churakov; Martin Kiefmann; Ursula Jordan; Jürgen Brosius; Jürgen Schmitz
Journal:  PLoS Biol       Date:  2006-03-14       Impact factor: 8.029

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  3 in total

1.  Patterns of rDNA and telomeric sequences diversification: contribution to repetitive DNA organization in Phyllostomidae bats.

Authors:  Merilane da Silva Calixto; Izaquiel Santos de Andrade; Diogo Cavalcanti Cabral-de-Mello; Neide Santos; Cesar Martins; Vilma Loreto; Maria José de Souza
Journal:  Genetica       Date:  2013-12-25       Impact factor: 1.082

2.  Chromosomal localization of rDNA genes and genomic organization of 5S rDNA in Oreochromis mossambicus, O. urolepis hornorum and their hybrid.

Authors:  Hua Ping Zhu; Mai Xin Lu; Feng Ying Gao; Zhang Han Huang; Li Ping Yang; Jian Fang Gui
Journal:  J Genet       Date:  2010-08       Impact factor: 1.166

3.  Evolutionary trends in animal ribosomal DNA loci: introduction to a new online database.

Authors:  Jana Sochorová; Sònia Garcia; Francisco Gálvez; Radka Symonová; Aleš Kovařík
Journal:  Chromosoma       Date:  2017-11-30       Impact factor: 4.316

  3 in total

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