Literature DB >> 18053705

Tissue microarrays: emerging standard for biomarker validation.

Saima Hassan1, Cristiano Ferrario, Aline Mamo, Mark Basik.   

Abstract

With the widespread use of DNA microarrays, hundreds of biomarkers are in need of validation in cohorts of well-annotated clinical samples. Tissue microarrays are emerging as the tool par excellence to rapidly perform DNA, RNA, and especially protein expression analyses on large numbers of clinical samples. Although still somewhat limited by the subjectivity of scoring methods and tissue sample representativeness, TMAs represent an increasingly validated means of understanding the clinical impact of diagnostic-related, prognostic-related, and therapy-related markers. Automated methods are being developed for TMA analysis and cell microarrays and frozen tissue TMAs have been better optimized. More and more biomarker studies are availing themselves of the high-throughput nature of TMAs, recognizing that they are becoming indispensable for rapid translation of laboratory data to the clinic.

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Year:  2007        PMID: 18053705     DOI: 10.1016/j.copbio.2007.10.009

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  21 in total

1.  Registration of whole immunohistochemical slide images: an efficient way to characterize biomarker colocalization.

Authors:  Xavier Moles Lopez; Paul Barbot; Yves-Rémi Van Eycke; Laurine Verset; Anne-Laure Trépant; Lionel Larbanoix; Isabelle Salmon; Christine Decaestecker
Journal:  J Am Med Inform Assoc       Date:  2014-08-14       Impact factor: 4.497

Review 2.  Recent developments in multiplexing techniques for immunohistochemistry.

Authors:  Angela R Dixon; Cédric Bathany; Michael Tsuei; Joshua White; Kate F Barald; Shuichi Takayama
Journal:  Expert Rev Mol Diagn       Date:  2015-08-06       Impact factor: 5.225

3.  Ezrin immunohistochemical expression in cartilaginous tumours: a useful tool for differential diagnosis between chondroblastic osteosarcoma and chondrosarcoma.

Authors:  Sébastien Salas; Gonzague de Pinieux; Anne Gomez-Brouchet; Frédérique Larrousserie; Xavier Leroy; Sébastien Aubert; Anne-Valérie Decouvelaere; Roch Giorgi; Carla Fernandez; Corinne Bouvier
Journal:  Virchows Arch       Date:  2008-12-03       Impact factor: 4.064

4.  Breast cancer diagnosis using a microfluidic multiplexed immunohistochemistry platform.

Authors:  Minseok S Kim; Taemin Kim; Sun-Young Kong; Soim Kwon; Chae Yun Bae; Jaekyu Choi; Chul Hwan Kim; Eun Sook Lee; Je-Kyun Park
Journal:  PLoS One       Date:  2010-05-03       Impact factor: 3.240

5.  High levels of carbonic anhydrase IX in tumour tissue and plasma are biomarkers of poor prognostic in patients with non-small cell lung cancer.

Authors:  M Ilie; N M Mazure; V Hofman; R E Ammadi; C Ortholan; C Bonnetaud; K Havet; N Venissac; B Mograbi; J Mouroux; J Pouysségur; P Hofman
Journal:  Br J Cancer       Date:  2010-05-11       Impact factor: 7.640

6.  Bcl-2 and β1-integrin predict survival in a tissue microarray of small cell lung cancer.

Authors:  M H Lawson; N M Cummings; D M Rassl; S L Vowler; M Wickens; W J Howat; J D Brenton; G Murphy; R C Rintoul
Journal:  Br J Cancer       Date:  2010-11-09       Impact factor: 7.640

7.  GRAPHIE: graph based histology image explorer.

Authors:  Hao Ding; Chao Wang; Kun Huang; Raghu Machiraju
Journal:  BMC Bioinformatics       Date:  2015-08-13       Impact factor: 3.169

8.  Statistical Methods for Tissue Array Images - Algorithmic Scoring and Co-training.

Authors:  Donghui Yan; Pei Wang; Beatrice S Knudsen; Michael Linden; Timothy W Randolph
Journal:  Ann Appl Stat       Date:  2012-09       Impact factor: 2.083

9.  Preparation, construction and high-throughput automated analysis of human brain tissue microarrays for neurodegenerative disease drug development.

Authors:  Malvindar K Singh-Bains; Nasim F Mehrabi; Adelie Y S Tan; Richard L M Faull; Mike Dragunow
Journal:  Nat Protoc       Date:  2021-03-19       Impact factor: 13.491

10.  Beta 1 integrin predicts survival in breast cancer: a clinicopathological and immunohistochemical study.

Authors:  Petra Barros dos Santos; Juliana S Zanetti; Alfredo Ribeiro-Silva; Eduardo I C Beltrão
Journal:  Diagn Pathol       Date:  2012-08-16       Impact factor: 2.644

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