Literature DB >> 18052368

Dipolar relaxation within the protein matrix of the green fluorescent protein: a red edge excitation shift study.

Sourav Haldar1, Amitabha Chattopadhyay.   

Abstract

The fluorophore in green fluorescent protein (GFP) is localized in a highly constrained environment, protected from the bulk solvent by the barrel-shaped protein matrix. We have used the wavelength-selective fluorescence approach (red edge excitation shift, REES) to monitor solvent (environment) dynamics around the fluorophore in enhanced green fluorescent protein (EGFP) under various conditions. Our results show that EGFP displays REES in buffer and glycerol, i.e., the fluorescence emission maxima exhibit a progressive shift toward the red edge, as the excitation wavelength is shifted toward the red edge of the absorption spectrum. Interestingly, EGFP displays REES when incorporated in reverse micelles of sodium bis(2-ethylhexyl)sulfosuccinate (AOT), independent of the hydration state. We interpret the observed REES to the constrained environment experienced by the EGFP fluorophore in the rigid protein matrix, rather than to the dynamics of the bulk solvent. These results are supported by the temperature dependence of REES and characteristic wavelength-dependent changes in fluorescence anisotropy.

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Year:  2007        PMID: 18052368     DOI: 10.1021/jp076797z

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  9 in total

1.  The green journey.

Authors:  Sourav Haldar; Amitabha Chattopadhyay
Journal:  J Fluoresc       Date:  2009-01       Impact factor: 2.217

2.  Green fluorescent protein: a molecular lantern that illuminates the cellular interior.

Authors:  Sourav Haldar; Amitabha Chattopadhyay
Journal:  J Biosci       Date:  2009-06       Impact factor: 1.826

3.  Organization of higher-order oligomers of the serotonin₁(A) receptor explored utilizing homo-FRET in live cells.

Authors:  Sourav Ganguly; Andrew H A Clayton; Amitabha Chattopadhyay
Journal:  Biophys J       Date:  2011-01-19       Impact factor: 4.033

4.  GFP fluorescence: A few lesser-known nuggets that make it work.

Authors:  Parijat Sarkar; Amitabha Chattopadhyay
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

5.  Silicon-doped carbon quantum dots with blue and green emission are a viable ratiometric fluorescent probe for hydroquinone.

Authors:  Yingnan Liu; Yuanyuan Cao; Tong Bu; Xinyu Sun; Taotao Zhe; Chen Huang; Siyu Yao; Li Wang
Journal:  Mikrochim Acta       Date:  2019-06-10       Impact factor: 5.833

6.  Exploring tryptophan dynamics in acid-induced molten globule state of bovine alpha-lactalbumin: a wavelength-selective fluorescence approach.

Authors:  Devaki A Kelkar; Arunima Chaudhuri; Sourav Haldar; Amitabha Chattopadhyay
Journal:  Eur Biophys J       Date:  2010-04-07       Impact factor: 1.733

7.  Organization and dynamics of the N-terminal domain of chemokine receptor CXCR1 in reverse micelles: effect of graded hydration.

Authors:  Arunima Chaudhuri; Pritam Basu; Sourav Haldar; Mamata Kombrabail; G Krishnamoorthy; Krishna Rajarathnam; Amitabha Chattopadhyay
Journal:  J Phys Chem B       Date:  2013-01-28       Impact factor: 2.991

8.  Endocytosis of a functionally enhanced GFP-tagged transferrin receptor in CHO cells.

Authors:  Qi He; Xiaoxu Sun; Chong Chu; Qing Jiang; Huifen Zhu; Yong He; Tingting Yue; Ruibo Wang; Ping Lei; Guanxin Shen
Journal:  PLoS One       Date:  2015-03-24       Impact factor: 3.240

9.  Lack of Environmental Sensitivity of a Naturally Occurring Fluorescent Analog of Cholesterol.

Authors:  Amitabha Chattopadhyay; Samares C Biswas; Raju Rukmini; Satyen Saha; Anunay Samanta
Journal:  J Fluoresc       Date:  2021-07-05       Impact factor: 2.217

  9 in total

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