Literature DB >> 18052112

The chemical toxicology of 2-deoxyribose oxidation in DNA.

Peter C Dedon1.   

Abstract

Damage to DNA and RNA caused by oxidative mechanisms has been well-studied for its potential role in the development of human disease. Only recently, though, have we begun to appreciate that oxidation of the 2-deoxyribose moiety in DNA is also a determinant of the genetic toxicology of oxidative stress and inflammation, with involvement in more than just "strand breaks", such as complex DNA lesions, protein-DNA cross-links, and protein and DNA adducts. As an update to a 1992 review of 2'-deoxyribose oxidation by bleomycin and the enediynes published in Chemical Research in Toxicology [Dedon, P. C., and Goldberg, I. H. (1992) Chem. Res. Toxicol. 5, 311-332], this review focuses on recent developments in the chemical biology, bioanalytical chemistry, and genetic toxicology of 2-deoxyribose oxidation products in DNA under biologically relevant conditions.

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Year:  2007        PMID: 18052112     DOI: 10.1021/tx700283c

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  59 in total

Review 1.  Biologically relevant oxidants and terminology, classification and nomenclature of oxidatively generated damage to nucleobases and 2-deoxyribose in nucleic acids.

Authors:  Jean Cadet; Steffen Loft; Ryszard Olinski; Mark D Evans; Karol Bialkowski; J Richard Wagner; Peter C Dedon; Peter Møller; Marc M Greenberg; Marcus S Cooke
Journal:  Free Radic Res       Date:  2012-02-22

2.  Telomere proteins POT1, TRF1 and TRF2 augment long-patch base excision repair in vitro.

Authors:  Adam S Miller; Lata Balakrishnan; Noah A Buncher; Patricia L Opresko; Robert A Bambara
Journal:  Cell Cycle       Date:  2012-03-01       Impact factor: 4.534

3.  Quantification of the 2-deoxyribonolactone and nucleoside 5'-aldehyde products of 2-deoxyribose oxidation in DNA and cells by isotope-dilution gas chromatography mass spectrometry: differential effects of gamma-radiation and Fe2+-EDTA.

Authors:  Wan Chan; Bingzi Chen; Lianrong Wang; Koli Taghizadeh; Michael S Demott; Peter C Dedon
Journal:  J Am Chem Soc       Date:  2010-05-05       Impact factor: 15.419

Review 4.  Mitochondrial DNA damage and its consequences for mitochondrial gene expression.

Authors:  Susan D Cline
Journal:  Biochim Biophys Acta       Date:  2012-06-19

5.  Tandem mass spectrometry-based detection of c4'-oxidized abasic sites at specific positions in DNA fragments.

Authors:  Goutam Chowdhury; F Peter Guengerich
Journal:  Chem Res Toxicol       Date:  2009-07       Impact factor: 3.739

6.  Formation of S-Cl phosphorothioate adduct radicals in dsDNA S-oligomers: hole transfer to guanine vs disulfide anion radical formation.

Authors:  Amitava Adhikary; Anil Kumar; Brian J Palmer; Andrew D Todd; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2013-08-14       Impact factor: 15.419

7.  Nucleotide excision repair of a DNA interstrand cross-link produces single- and double-strand breaks.

Authors:  Xiaohua Peng; Avik K Ghosh; Bennett Van Houten; Marc M Greenberg
Journal:  Biochemistry       Date:  2010-01-12       Impact factor: 3.162

Review 8.  Oxidative stress, DNA damage, and the telomeric complex as therapeutic targets in acute neurodegeneration.

Authors:  Joshua A Smith; Sookyoung Park; James S Krause; Naren L Banik
Journal:  Neurochem Int       Date:  2013-02-17       Impact factor: 3.921

9.  Toward consensus in the analysis of urinary 8-oxo-7,8-dihydro-2'-deoxyguanosine as a noninvasive biomarker of oxidative stress.

Authors:  Mark D Evans; Ryszard Olinski; Steffen Loft; Marcus S Cooke
Journal:  FASEB J       Date:  2009-12-04       Impact factor: 5.191

10.  Double-strand break formation during nucleotide excision repair of a DNA interstrand cross-link.

Authors:  Jonathan T Sczepanski; Aaron C Jacobs; Bennett Van Houten; Marc M Greenberg
Journal:  Biochemistry       Date:  2009-08-18       Impact factor: 3.162

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