Literature DB >> 18051120

Real-time nonlinear finite element analysis for surgical simulation using graphics processing units.

Zeike A Taylor1, Mario Cheng, Sébastien Ourselin.   

Abstract

Clinical employment of biomechanical modelling techniques in areas of medical image analysis and surgical simulation is often hindered by conflicting requirements for high fidelity in the modelling approach and high solution speeds. We report the development of techniques for high-speed nonlinear finite element (FE) analysis for surgical simulation. We employ a previously developed nonlinear total Lagrangian explicit FE formulation which offers significant computational advantages for soft tissue simulation. However, the key contribution of the work is the presentation of a fast graphics processing unit (GPU) solution scheme for the FE equations. To the best of our knowledge this represents the first GPU implementation of a nonlinear FE solver. We show that the present explicit FE scheme is well-suited to solution via highly parallel graphics hardware, and that even a midrange GPU allows significant solution speed gains (up to 16.4x) compared with equivalent CPU implementations. For the models tested the scheme allows real-time solution of models with up to 16000 tetrahedral elements. The use of GPUs for such purposes offers a cost-effective high-performance alternative to expensive multi-CPU machines, and may have important applications in medical image analysis and surgical simulation.

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Year:  2007        PMID: 18051120     DOI: 10.1007/978-3-540-75757-3_85

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  3 in total

1.  An information-based machine learning approach to elasticity imaging.

Authors:  Cameron Hoerig; Jamshid Ghaboussi; Michael F Insana
Journal:  Biomech Model Mechanobiol       Date:  2016-11-18

2.  Approach-specific multi-grid anatomical modeling for neurosurgery simulation with public-domain and open-source software.

Authors:  Michel A Audette; Denis Rivière; Charles Law; Luis Ibanez; Stephen R Aylward; Julien Finet; Xunlei Wu; Matthew G Ewend
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-03-01

3.  NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics.

Authors:  Stian F Johnsen; Zeike A Taylor; Matthew J Clarkson; John Hipwell; Marc Modat; Bjoern Eiben; Lianghao Han; Yipeng Hu; Thomy Mertzanidou; David J Hawkes; Sebastien Ourselin
Journal:  Int J Comput Assist Radiol Surg       Date:  2014-09-21       Impact factor: 2.924

  3 in total

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